Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b21215 and SM_b21307 are separated by 117 nucleotidesSM_b21307 and SM_b21308 are separated by 44 nucleotidesSM_b21308 and SM_b21309 overlap by 4 nucleotidesSM_b21309 and SM_b21310 are separated by 8 nucleotides SM_b21215: SM_b21215 - dipeptide uptake ABC transporter substrate-binding protein precursor, at 968,095 to 969,702 _b21215 SM_b21307: SM_b21307 - hypothetical protein, at 969,820 to 970,797 _b21307 SM_b21308: SM_b21308 - glycosyltransferase, forming alpha glycosyl linkages protein, at 970,842 to 972,164 _b21308 SM_b21309: SM_b21309 - hypothetical protein, at 972,161 to 974,377 _b21309 SM_b21310: SM_b21310 - hypothetical protein, at 974,386 to 975,090 _b21310
Group Condition SM_b21215 SM_b21307 SM_b21308 SM_b21309 SM_b21310
carbon source acetate (C) +0.0 +0.1 -0.3 -0.3 -0.6
temperature LB, 23C -0.1 -0.0 -0.4 -0.1 -0.3
nitrogen source L-Arginine (N) -0.1 +0.3 -0.3 -0.1 -0.8
carbon source pipercolic (C) -0.1 +0.1 -0.4 -0.2 -0.3
nitrogen source NAG (N) +0.2 -0.1 -0.2 -0.0 -0.5
pH LB, pH6 +0.1 +0.2 -0.4 -0.1 -0.5
carbon source 5-Aminovaleric (C) +0.1 +0.0 +0.2 -0.3 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.1 -0.7 -0.1 +0.3
r2a control R2A control for volatile experiments -0.2 -0.1 +0.5 +0.1 -0.8
carbon source 5-Aminovaleric (C) -0.1 +0.2 +0.2 -0.3 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.1 -0.6 -0.0 +0.3
lb no stress control LB no stress control -0.3 -0.1 -0.3 -0.1 +0.3
nitrogen source nitrate (N) +0.3 -0.2 +0.2 -0.1 -0.5
lb LB +0.0 -0.0 -0.6 -0.1 +0.5
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.0 -0.1 +0.2 +0.2 -0.5
stress Paraquat dichloride 0.2 mg/ml +0.2 -0.0 +0.3 -0.1 -0.4
nitrogen source Gly-DL-Asp (N) +0.3 -0.0 +0.3 -0.1 -0.6
stress Aluminum chloride +0.1 -0.2 +0.2 -0.4 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.1 -0.4 +0.2 +0.5
carbon source D-Trehalose (C) +0.1 +0.1 -0.2 -0.2 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.0 -0.5 +0.3 +0.0
nitrogen source L-Serine (N) +0.1 +0.3 +0.2 +0.1 -0.4
r2a control R2A control -0.1 -0.1 -0.3 +0.1 +0.7
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 +0.0 +0.4 +0.4 -0.1
nitrogen source Gelatin (N) +0.3 +0.1 +0.4 -0.0 -0.2
carbon source Beta-Lactose (C) -0.1 +0.1 +0.2 -0.1 +0.6
stress copper (II) chloride 1 mM +0.2 -0.3 +0.6 -0.2 +0.5
carbon source D-Glucose (C) +0.1 +0.2 +0.2 -0.1 +0.4
stress Nickel (II) chloride 1 mM +0.2 +0.1 +0.2 +0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.1 +0.5 -0.2 +0.7
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