Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b21162 and SM_b21163 are separated by 197 nucleotidesSM_b21163 and SM_b21164 are separated by 2 nucleotidesSM_b21164 and SM_b21165 are separated by 1 nucleotidesSM_b21165 and SM_b21166 overlap by 4 nucleotides SM_b21162: SM_b21162 - integral membrane transporter protein, at 906,757 to 907,971 _b21162 SM_b21163: SM_b21163 - Urocanate hydratase (EC 4.2.1.49) (from data), at 908,169 to 909,842 _b21163 SM_b21164: SM_b21164 - N-formylglutamate deformylase (EC 3.5.1.68) (from data), at 909,845 to 910,660 _b21164 SM_b21165: SM_b21165 - Histidine ammonia-lyase (EC 4.3.1.3) (from data), at 910,662 to 912,197 _b21165 SM_b21166: SM_b21166 - Imidazolonepropionase (EC 3.5.2.7) (from data), at 912,194 to 913,609 _b21166
Group Condition SM_b21162 SM_b21163 SM_b21164 SM_b21165 SM_b21166
carbon source L-Histidine (C) -0.0 -5.4 -4.4 -4.9 -6.3
nitrogen source L-Histidine (N) -0.2 -2.0 -2.3 -1.6 -1.7
nutrient L-Histidine +0.1 -1.6 -1.2 -1.0 -1.0
nutrient L-Histidine -0.0 -1.2 -1.5 -0.7 -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.8 -0.3 -0.1 -0.2
r2a control R2A control +0.1 -0.6 +0.0 -0.2 -0.3
lb no stress control LB no stress control -0.1 -0.4 -0.5 +0.3 -0.1
r2a-hepes control R2A-HEPES control for volatile experiments -0.2 -0.4 -0.3 -0.3 +0.5
nitrogen source L-Arginine (N) +0.3 +0.4 -0.3 -0.2 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.3 -0.4 +0.1 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 -0.4 +0.4 -0.0 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.5 +0.3 +0.4 +0.2
stress Paraquat dichloride 0.3 mg/ml -0.2 +0.1 +0.4 +0.4 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.2 -0.2 +0.2 +0.6
carbon source D-Glucose (C) +0.1 -0.1 +0.4 +0.4 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.3 +0.5 +0.1 +0.3
stress Chlorite 0.1 mM -0.2 +0.5 +0.0 +0.0 +0.4
stress D-Cycloserine 0.05 mg/ml -0.1 +0.5 +0.4 -0.1 +0.3
nitrogen source L-Leucine (N) -0.2 +0.1 +0.3 +0.4 +0.4
lb LB -0.1 +0.3 +0.4 +0.1 +0.4
stress Cobalt chloride 0.16 mM +0.0 +0.2 +0.4 +0.2 +0.3
stress Cisplatin 0.001 mg/ml -0.1 +0.2 +0.5 +0.2 +0.5
stress Aluminum chloride +0.2 +0.2 +0.4 +0.1 +0.5
stress Nickel (II) chloride 1 mM +0.0 +0.0 +0.2 +0.6 +0.6
stress perchlorate 10 mM -0.0 +0.4 +0.5 +0.1 +0.4
pH LB, pH6 -0.0 +1.0 +0.3 -0.0 +0.3
lb LB +0.1 +0.3 +0.4 +0.2 +0.7
stress Paraquat dichloride 0.05 mg/ml +0.1 +0.3 +0.5 +0.4 +0.4
pH LB, pH6 +0.1 +1.0 +0.6 -0.3 +0.6
stress Polymyxin B sulfate 0.00005 mg/ml +0.1 +0.0 +0.7 +0.4 +0.7
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