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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b21303 and SM_b21304 are separated by 33 nucleotides
SM_b21304 and SM_b21143 are separated by 195 nucleotides
SM_b21143 and SM_b21144 are separated by 190 nucleotides
SM_b21144 and SM_b21145 are separated by 77 nucleotides
SM_b21303: SM_b21303 - hypothetical protein, at 885,495 to 885,923
_b21303
SM_b21304: SM_b21304 - NG,NG-dimethylarginine dimethylaminohydrolase (dimethylargininase) protein, at 885,957 to 886,751
_b21304
SM_b21143: SM_b21143 - mercuric reductase, at 886,947 to 888,368
_b21143
SM_b21144: SM_b21144 - choline uptake ABC transporter substrate-binding protein precursor, at 888,559 to 889,476
_b21144
SM_b21145: SM_b21145 - choline uptake ABC transporter permease, at 889,554 to 890,753
_b21145
Group
Condition
SM
_b21303
SM
_b21304
SM
_b21143
SM
_b21144
SM
_b21145
stress
Cisplatin 0.001 mg/ml
+0.2
-0.5
-0.5
-0.7
+0.3
lb
LB
-0.4
-0.2
+0.2
-0.2
-0.5
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.1
-0.0
-0.4
-0.1
-0.8
stress
Aluminum chloride
-0.7
-0.0
+0.6
-0.2
-0.7
dmso control
DMSO control
-0.3
+0.3
-0.2
-0.1
-0.7
stress
Chlorite 0.1 mM
-0.3
+0.2
+0.2
-0.4
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.1
+0.2
-0.3
-0.7
+0.2
stress
Cisplatin 0.0005 mg/ml
-0.1
+0.3
-0.2
-0.3
-0.3
nitrogen source
L-Leucine (N)
-0.0
+0.2
-0.0
+0.2
-0.9
stress
Polymyxin B sulfate 0.00005 mg/ml
-1.0
+0.5
-0.1
+0.1
-0.1
stress
copper (II) chloride 1 mM
-0.5
+0.3
-0.3
+0.2
+0.0
temperature
LB, 23C
-0.4
-0.4
+0.0
+0.2
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+0.4
+0.1
-0.5
-0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.4
+0.1
-0.1
+0.4
-0.1
nitrogen source
Cytosine (N)
-0.6
+0.3
-0.1
+0.3
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.6
+0.7
-0.1
+0.1
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
+0.4
-0.2
+0.3
+0.2
carbon source
D-Ribose (C)
+0.2
-0.3
+0.2
+0.3
+0.1
stress
copper (II) chloride 1 mM
+0.3
+0.4
-0.2
-0.2
+0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
+0.5
-0.2
+0.1
-0.1
carbon source
D-Glucose (C)
+0.3
-0.4
+0.2
+0.4
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.5
+0.3
+0.1
+0.3
carbon source
D-Sorbitol (C)
-0.2
+0.6
+0.2
+0.1
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
+0.2
+0.2
+0.1
+0.9
stress
D-Cycloserine 0.05 mg/ml
-0.2
+0.4
-0.1
+0.3
+0.6
r2a control
R2A control for volatile experiments
+0.0
+0.5
-0.3
+0.6
+0.4
carbon source
acetate (C)
+0.1
+0.3
+0.1
+0.4
+0.4
stress
Paraquat dichloride 0.2 mg/ml
+0.2
+1.0
+0.1
+0.2
+0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.1
+0.8
+0.3
+0.7
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.7
+0.2
+0.5
+0.4
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