Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b21110 and SM_b21111 overlap by 4 nucleotidesSM_b21111 and SM_b21112 are separated by 22 nucleotidesSM_b21112 and SM_b21113 are separated by 123 nucleotidesSM_b21113 and SM_b21114 are separated by 44 nucleotides SM_b21110: SM_b21110 - dehydratase involved in L-fucose catabolism (from data), at 751,761 to 752,222 _b21110 SM_b21111: SM_b21111 - oxidoreductase, RED superfamily protein, at 752,219 to 752,953 _b21111 SM_b21112: SM_b21112 - L-2,4-diketo-3-deoxyrhamnonate hydrolase; 2,4-dioxopentanoate hydrolase (from data), at 752,976 to 753,821 _b21112 SM_b21113: SM_b21113 - hypothetical protein, at 753,945 to 755,222 _b21113 SM_b21114: SM_b21114 - nitrate transport protein, at 755,267 to 756,592 _b21114
Group Condition SM_b21110 SM_b21111 SM_b21112 SM_b21113 SM_b21114
carbon source L-Fucose (C) -4.2 -4.9 -6.0 -0.8 -0.3
carbon source D-Arabinose (C) -0.2 +0.6 -4.3 -0.2 +0.1
nitrogen source L-Leucine (N) -0.1 -0.8 -0.2 -0.1 -1.7
nitrogen source Gly-DL-Asp (N) -0.4 -1.4 -0.2 -0.1 -0.6
nitrogen source L-Asparagine (N) -0.6 -0.1 -1.2 -0.0 -0.3
nitrogen source Uridine (N) -0.3 -0.1 -0.7 -0.4 -0.8
nitrogen source L-Glutamine (N) -0.4 -0.1 -0.3 -0.4 -0.4
nitrogen source NAG (N) +0.0 -0.3 -0.5 -0.3 -0.5
carbon source D-Xylose (C) -0.6 +0.0 -0.9 -0.1 +0.0
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 -0.0 +0.2 -0.2 -1.1
nitrogen source L-Arginine (N) -0.8 +0.2 -0.1 -0.4 +0.0
nitrogen source nitrate (N) -0.4 +0.2 -0.4 -0.4 -0.1
nitrogen source Cytosine (N) +0.1 -0.4 -0.3 -0.5 +0.4
nitrogen source L-Serine (N) -0.4 +0.3 -0.2 -0.1 -0.3
stress Cisplatin 0.001 mg/ml +0.1 +0.4 -0.8 -0.4 +0.0
carbon source D-Ribose (C) -0.2 +0.4 -0.6 -0.1 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 +1.0 +0.1 -0.0 -0.3
stress perchlorate 10 mM -0.4 +0.9 -0.1 +0.1 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 +1.1 -0.2 -0.1 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +1.0 -0.1 -0.3 -0.1
stress Aluminum chloride +0.0 +0.8 -0.6 +0.1 +0.1
stress Polymyxin B sulfate 0.00005 mg/ml -0.1 +0.7 -0.4 +0.1 +0.2
stress Nickel (II) chloride 1 mM -0.2 +0.8 +0.3 -0.3 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.8 -0.1 +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 +1.1 +0.2 -0.3 +0.4
r2a control R2A control for volatile experiments -0.2 +0.3 +0.5 +0.2 +0.2
stress Chlorite 0.1 mM +0.1 +1.6 -0.8 +0.0 +0.3
pH LB, pH6 +0.1 +0.7 -0.1 +0.1 +0.5
pH LB, pH6 +0.1 +0.9 +0.1 -0.0 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 +1.1 +0.3 +0.1 +0.2
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