Fitness for 5 genes in Sinorhizobium meliloti 1021

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	SM_b21087	SM_b21088	SM_b21089	SM_b21090	SM_b21091
nitrogen source	L-Arginine (N)	+0.3	-0.8	+0.0	-0.1	N.D.
stress	Paraquat dichloride 0.2 mg/ml	-0.6	-0.1	-0.1	+0.2	N.D.
carbon source	D-Glucose (C)	-0.7	+0.3	-0.1	-0.0	N.D.
nutrient	L-Histidine	-0.8	+0.3	+0.2	+0.0	N.D.
carbon source	5-Aminovaleric (C)	+0.4	-0.5	-0.0	+0.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.3	+0.5	-0.3	+0.1	N.D.
stress	Paraquat dichloride 0.3 mg/ml	+0.2	-0.4	+0.2	-0.1	N.D.
carbon source	D-Glucose (C)	+0.5	-0.6	+0.0	+0.1	N.D.
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	+0.5	-0.2	-0.1	-0.2	N.D.
stress	Cisplatin 0.001 mg/ml	+0.6	-0.0	-0.3	-0.1	N.D.
nitrogen source	Gly-DL-Asp (N)	+0.5	+0.3	-0.5	-0.0	N.D.
pH	LB, pH6	+0.3	+0.2	+0.1	-0.4	N.D.
stress	Polymyxin B sulfate 0.00005 mg/ml	-0.4	+0.3	+0.1	+0.3	N.D.
carbon source	5-Aminovaleric (C)	+0.4	-0.2	+0.2	-0.1	N.D.
stress	copper (II) chloride 1 mM	+0.9	-0.2	-0.1	-0.3	N.D.
carbon source	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)	+0.6	-0.3	+0.2	-0.1	N.D.
carbon source	methyl-beta-D-xylopyranoside (C)	+0.8	-0.3	-0.0	-0.0	N.D.
carbon source	D-Mannose (C)	+0.6	-0.3	+0.0	+0.3	N.D.
pH	LB, pH6	+0.6	+0.0	-0.2	+0.1	N.D.
carbon source	methyl 3-keto-a-D-glucopyranoside (C)	+0.7	-0.0	+0.1	-0.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.9	-0.6	+0.4	-0.0	N.D.
carbon source	acetate (C)	+0.6	-0.3	+0.2	+0.3	N.D.
nitrogen source	D-Glucosamine Hydrochloride (N)	+0.8	+0.2	-0.1	-0.0	N.D.
r2a control	R2A control for volatile experiments	+0.4	+0.2	+0.1	+0.2	N.D.
carbon source	Lactitol (C)	+0.3	+0.1	+0.3	+0.3	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5	+0.5	+0.1	-0.0	N.D.
volatiles	R2A-HEPES with volatiles from Trichoderma atroviridae IMI	+0.6	+0.2	+0.0	+0.2	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0	+0.1	-0.1	+0.0	N.D.
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	+0.8	+0.3	+0.1	-0.1	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.3	+0.1	+0.1	+0.2	N.D.