Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b21081 and SM_b21082 are separated by 31 nucleotidesSM_b21082 and SM_b21083 are separated by 135 nucleotidesSM_b21083 and SM_b21084 overlap by 4 nucleotidesSM_b21084 and SM_b21085 are separated by 62 nucleotides SM_b21081: SM_b21081 - phosphoglucomutase phosphomannomutase, at 718,406 to 719,953 _b21081 SM_b21082: SM_b21082 - mannose-6-phosphate isomerase, GDP-mannose pyrophosphorylase, at 719,985 to 722,288 _b21082 SM_b21083: SM_b21083 - hypothetical protein, at 722,424 to 722,867 _b21083 SM_b21084: SM_b21084 - hypothetical protein, at 722,864 to 723,217 _b21084 SM_b21085: SM_b21085 - hypothetical protein, at 723,280 to 724,932 _b21085
Group Condition SM_b21081 SM_b21082 SM_b21083 SM_b21084 SM_b21085
carbon source Methyl beta-D-glucopyranoside (C) -0.1 -0.2 N.D. -1.7 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.0 N.D. -1.6 +0.4
stress Cisplatin 0.001 mg/ml +0.2 -0.3 N.D. -0.3 -0.7
stress 3-octanone 5.310333333 mM -0.2 +0.1 N.D. -1.0 +0.0
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 +0.0 N.D. -0.7 -0.5
carbon source Protocatechuic Acid (C) -0.2 +0.0 N.D. +0.3 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.1 N.D. -0.7 +0.5
nitrogen source Cytosine (N) +0.3 +0.2 N.D. -0.0 -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.1 N.D. +0.6 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.1 N.D. -0.6 +0.9
carbon source 5-Aminovaleric (C) +0.0 +0.1 N.D. +0.7 -0.4
carbon source D-Mannitol (C) +0.2 -0.1 N.D. +0.8 -0.4
carbon source D-Glucose (C) -0.1 +0.1 N.D. +0.8 -0.3
carbon source L-Arabinose (C) -0.1 +0.0 N.D. +1.0 -0.3
stress Cisplatin 0.0005 mg/ml -0.2 -0.3 N.D. +1.2 -0.0
carbon source L-Lysine (C) -0.1 +0.0 N.D. +1.0 -0.2
stress Paraquat dichloride 0.2 mg/ml -0.0 -0.1 N.D. +1.3 -0.3
stress Fusidic 0.0001 mg/ml -0.0 -0.1 N.D. +0.5 +0.6
stress D-Cycloserine 0.05 mg/ml -0.1 +0.0 N.D. +0.6 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.1 N.D. +0.5 +0.8
temperature LB, 23C +0.2 -0.1 N.D. +0.8 +0.3
lb LB -0.2 -0.1 N.D. +0.6 +0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.0 N.D. +0.6 +0.7
stress Sisomicin 0.004 mg/ml +0.0 -0.2 N.D. +1.1 +0.4
stress 3-octanone 2.655166667 mM +0.2 +0.0 N.D. +0.7 +0.5
stress copper (II) chloride 1 mM +0.1 -0.2 N.D. +1.4 +0.2
stress Thallium(I) acetate 0.0025 mg/ml +0.2 -0.1 N.D. +1.1 +0.4
nutrient Min media with glucose +0.3 +0.2 N.D. +0.7 +0.6
nitrogen source L-Arginine (N) +0.1 -0.1 N.D. +1.0 +0.8
pH LB, pH6 +0.4 +0.0 N.D. +1.5 +0.3
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