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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b21081 and SM_b21082 are separated by 31 nucleotides
SM_b21082 and SM_b21083 are separated by 135 nucleotides
SM_b21083 and SM_b21084 overlap by 4 nucleotides
SM_b21084 and SM_b21085 are separated by 62 nucleotides
SM_b21081: SM_b21081 - phosphoglucomutase phosphomannomutase, at 718,406 to 719,953
_b21081
SM_b21082: SM_b21082 - mannose-6-phosphate isomerase, GDP-mannose pyrophosphorylase, at 719,985 to 722,288
_b21082
SM_b21083: SM_b21083 - hypothetical protein, at 722,424 to 722,867
_b21083
SM_b21084: SM_b21084 - hypothetical protein, at 722,864 to 723,217
_b21084
SM_b21085: SM_b21085 - hypothetical protein, at 723,280 to 724,932
_b21085
Group
Condition
SM
_b21081
SM
_b21082
SM
_b21083
SM
_b21084
SM
_b21085
carbon source
Methyl beta-D-glucopyranoside (C)
-0.1
-0.2
N.D.
-1.7
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-0.0
N.D.
-1.6
+0.4
stress
Cisplatin 0.001 mg/ml
+0.2
-0.3
N.D.
-0.3
-0.7
stress
3-octanone 5.310333333 mM
-0.2
+0.1
N.D.
-1.0
+0.0
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
+0.0
N.D.
-0.7
-0.5
carbon source
Protocatechuic Acid (C)
-0.2
+0.0
N.D.
+0.3
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.1
N.D.
-0.7
+0.5
nitrogen source
Cytosine (N)
+0.3
+0.2
N.D.
-0.0
-0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.1
N.D.
+0.6
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-0.1
N.D.
-0.6
+0.9
carbon source
5-Aminovaleric (C)
+0.0
+0.1
N.D.
+0.7
-0.4
carbon source
D-Mannitol (C)
+0.2
-0.1
N.D.
+0.8
-0.4
carbon source
D-Glucose (C)
-0.1
+0.1
N.D.
+0.8
-0.3
carbon source
L-Arabinose (C)
-0.1
+0.0
N.D.
+1.0
-0.3
stress
Cisplatin 0.0005 mg/ml
-0.2
-0.3
N.D.
+1.2
-0.0
carbon source
L-Lysine (C)
-0.1
+0.0
N.D.
+1.0
-0.2
stress
Paraquat dichloride 0.2 mg/ml
-0.0
-0.1
N.D.
+1.3
-0.3
stress
Fusidic 0.0001 mg/ml
-0.0
-0.1
N.D.
+0.5
+0.6
stress
D-Cycloserine 0.05 mg/ml
-0.1
+0.0
N.D.
+0.6
+0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.1
N.D.
+0.5
+0.8
temperature
LB, 23C
+0.2
-0.1
N.D.
+0.8
+0.3
lb
LB
-0.2
-0.1
N.D.
+0.6
+0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.0
N.D.
+0.6
+0.7
stress
Sisomicin 0.004 mg/ml
+0.0
-0.2
N.D.
+1.1
+0.4
stress
3-octanone 2.655166667 mM
+0.2
+0.0
N.D.
+0.7
+0.5
stress
copper (II) chloride 1 mM
+0.1
-0.2
N.D.
+1.4
+0.2
stress
Thallium(I) acetate 0.0025 mg/ml
+0.2
-0.1
N.D.
+1.1
+0.4
nutrient
Min media with glucose
+0.3
+0.2
N.D.
+0.7
+0.6
nitrogen source
L-Arginine (N)
+0.1
-0.1
N.D.
+1.0
+0.8
pH
LB, pH6
+0.4
+0.0
N.D.
+1.5
+0.3
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