Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 243 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
SM_b21005 and SM_b21006 are separated by 9 nucleotides
SM_b21006 and SM_b21007 are separated by 37 nucleotides
SM_b21007 and SM_b21008 overlap by 4 nucleotides
SM_b21008 and SM_b21009 are separated by 247 nucleotides
SM_b21005: SM_b21005 - hypothetical protein, at 1,240,562 to 1,241,029
_b21005
SM_b21006: SM_b21006 - hypothetical protein, at 1,241,039 to 1,241,281
_b21006
SM_b21007: SM_b21007 - hypothetical protein, at 1,241,319 to 1,241,738
_b21007
SM_b21008: SM_b21008 - ArsR family transcriptional regulator, at 1,241,735 to 1,242,067
_b21008
SM_b21009: SM_b21009 - Glycerol kinase (EC 2.7.1.30)
(from data)
, at 1,242,315 to 1,243,808
_b21009
Group
Condition
SM
_b21005
SM
_b21006
SM
_b21007
SM
_b21008
SM
_b21009
carbon source
Glycerol (C)
-0.2
+0.0
+0.1
-0.0
-2.5
nitrogen source
L-Arginine (N)
-0.0
+0.0
-0.7
-0.7
-0.2
stress
Nickel (II) chloride 1 mM
-0.1
+0.2
-0.5
-0.2
-0.8
pH
LB, pH6
-0.2
-0.0
-0.6
-0.4
-0.0
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.3
-0.0
-0.3
-0.6
+0.0
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.1
+0.0
-0.3
-1.0
+0.0
stress
3-octanone 2.655166667 mM
-0.0
-0.0
-0.9
+0.0
-0.2
stress
3-octanone 2.655166667 mM
+0.0
-0.0
-0.8
-0.3
-0.1
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.1
+0.1
-0.5
-0.6
+0.1
pH
LB, pH8
+0.1
-0.1
-0.4
-0.3
-0.5
stress
nitrite 20 mM
-0.1
+0.0
-0.9
-0.2
+0.1
stress
copper (II) chloride 1 mM
+0.1
+0.2
-1.1
-0.0
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
-0.0
-0.3
-0.5
+0.3
carbon source
D-Glucose (C)
-0.5
-0.0
-0.4
-0.2
+0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.1
-0.1
-0.4
-0.5
+0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.3
-0.1
-0.3
-0.4
-0.1
stress
Thallium(I) acetate 0.0025 mg/ml
-0.3
-0.2
-0.5
+0.1
+0.3
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.3
-0.2
-0.4
+0.4
-0.1
stress
D-Cycloserine 0.05 mg/ml
-0.1
-0.2
-0.5
+0.3
+0.1
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.1
-0.1
-0.6
+0.1
+0.4
stress
Aluminum chloride
-0.5
+0.3
-0.3
+0.4
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.2
+0.5
-0.3
-0.0
lb
LB
-0.1
+0.0
-0.5
+0.5
+0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
+0.3
+0.3
-0.1
-0.4
nitrogen source
Gly-DL-Asp (N)
-0.2
-0.0
+0.4
+0.4
-0.2
stress
Cisplatin 0.001 mg/ml
-0.4
+0.0
+0.3
+0.2
+0.5
carbon source
D-Glucose (C)
-0.0
+0.2
+0.8
+0.1
-0.1
stress
Sisomicin 0.004 mg/ml
-0.2
+0.1
+0.2
+0.5
+0.6
stress
Fusidic 0.0001 mg/ml
+0.1
-0.0
+0.0
+0.1
+1.1
nitrogen source
L-Asparagine (N)
+0.5
+0.4
+0.3
+0.6
+0.1
remove
SM_b21005
plot
remove
SM_b21006
plot
remove
SM_b21007
remove
SM_b21008
plot
remove
SM_b21009
plot