Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20967 and SM_b20968 are separated by 7 nucleotidesSM_b20968 and SM_b20969 are separated by 3 nucleotidesSM_b20969 and SM_b20970 overlap by 8 nucleotidesSM_b20970 and SM_b20971 are separated by 12 nucleotides SM_b20967: SM_b20967 - LacI family transcriptional regulator, at 1,196,376 to 1,197,410 _b20967 SM_b20968: SM_b20968 - hypothetical protein, at 1,197,418 to 1,199,130 _b20968 SM_b20969: SM_b20969 - sugar uptake ABC transporter permease, at 1,199,134 to 1,199,946 _b20969 SM_b20970: SM_b20970 - sugar uptake ABC transporter permease, at 1,199,939 to 1,200,898 _b20970 SM_b20971: SM_b20971 - sugar uptake ABC transporter substrate-binding protein precursor, at 1,200,911 to 1,202,143 _b20971
Group Condition SM_b20967 SM_b20968 SM_b20969 SM_b20970 SM_b20971
nitrogen source NAG (N) +0.1 -0.4 -0.5 -0.3 +0.0
nitrogen source Cytosine (N) +0.0 -0.3 -0.3 -0.4 -0.0
stress Cisplatin 0.001 mg/ml -0.2 -0.5 -0.1 -0.1 -0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -0.3 +0.1 -0.1 -0.2
stress Polymyxin B sulfate 0.00005 mg/ml -0.6 -0.2 +0.0 +0.1 +0.0
nitrogen source Gelatin (N) -0.4 -0.3 -0.1 -0.1 +0.2
lb LB -0.4 -0.1 +0.0 -0.1 -0.1
nitrogen source L-Asparagine (N) -0.4 -0.1 +0.4 -0.4 -0.0
nitrogen source L-Glutamine (N) -0.1 -0.2 +0.0 -0.3 +0.1
stress 3-octanone 0.456 mM -0.0 -0.3 -0.4 +0.2 -0.0
nitrogen source nitrate (N) +0.1 +0.0 -0.1 -0.5 +0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 +0.1 -0.3 -0.3 -0.1
stress Aluminum chloride -0.4 -0.1 -0.0 +0.1 +0.1
nitrogen source L-Histidine (N) -0.1 -0.2 +0.1 +0.1 -0.1
stress 3-octanone 2.655166667 mM +0.2 -0.0 -0.2 +0.1 -0.1
carbon source Methyl beta-D-glucopyranoside (C) -0.3 -0.1 +0.2 +0.2 -0.1
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM -0.1 -0.3 -0.2 +0.3 +0.1
nitrogen source L-Arginine (N) +0.2 -0.1 +0.0 -0.4 +0.2
lb LB -0.3 +0.2 +0.0 +0.1 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 +0.3 +0.1 +0.2 -0.1
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM +0.1 +0.1 -0.2 +0.2 -0.1
stress perchlorate 10 mM -0.3 -0.1 +0.3 +0.2 +0.1
carbon source acetate (C) -0.3 +0.1 +0.1 +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 +0.0 +0.4 +0.4 -0.2
carbon source Lactulose (C) -0.2 +0.2 +0.2 +0.1 +0.0
carbon source Myristic (C) -0.2 +0.2 +0.1 +0.2 +0.0
carbon source D-Trehalose (C) -0.2 +0.0 +0.3 +0.3 +0.0
carbon source Sucrose (C) -0.1 +0.3 +0.1 +0.1 +0.1
carbon source D-Ribose (C) +0.1 +0.1 +0.1 +0.2 +0.2
carbon source 5-Aminovaleric (C) +0.2 +0.3 +0.1 +0.4 -0.0
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