Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20716 and SM_b20717 are separated by 88 nucleotidesSM_b20717 and SM_b20718 are separated by 266 nucleotidesSM_b20718 and SM_b20719 are separated by 77 nucleotidesSM_b20719 and SM_b20720 are separated by 65 nucleotides SM_b20716: SM_b20716 - hypothetical protein, at 1,519,556 to 1,520,452 _b20716 SM_b20717: SM_b20717 - LacI family transcriptional regulator, at 1,520,541 to 1,521,566 _b20717 SM_b20718: SM_b20718 - sugar uptake ABC transporter ATP-binding protein, at 1,521,833 to 1,523,359 _b20718 SM_b20719: SM_b20719 - sugar uptake ABC transporter permease, at 1,523,437 to 1,524,447 _b20719 SM_b20720: SM_b20720 - sugar uptake ABC transporter substrate-binding protein precursor, at 1,524,513 to 1,525,463 _b20720
Group Condition SM_b20716 SM_b20717 SM_b20718 SM_b20719 SM_b20720
stress Polymyxin B sulfate 0.00005 mg/ml -0.9 -0.0 +0.1 -0.6 +0.1
nitrogen source L-Leucine (N) -0.0 -0.2 +0.0 +0.1 -0.9
carbon source D-Arabinose (C) -0.2 -0.8 -0.0 +0.0 +0.0
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.2 -1.6 +0.4 +0.2 +0.4
nitrogen source nitrate (N) -0.0 +0.4 -0.2 -0.8 -0.1
carbon source L-Histidine (C) -0.1 -0.5 -0.1 +0.2 -0.1
nutrient Min media with glucose +0.3 +0.2 -0.2 -0.4 -0.3
nitrogen source L-Arginine (N) +0.3 -0.3 +0.1 -0.2 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.3 -0.1 -0.5 +0.2
stress 1-octen-3-ol 0.6030326667 mM -0.2 +0.2 +0.1 -0.5 +0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 -0.2 +0.3 -0.0 -0.5
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.1 -1.1 +0.3 +0.6 +0.1
nitrogen source Cytosine (N) +0.3 +0.3 -0.1 -0.1 -0.5
pH LB, pH6 -0.3 +0.5 -0.3 -0.2 +0.1
nitrogen source L-Histidine (N) +0.3 +0.2 +0.1 -0.3 -0.3
stress nitrate 40 mM +0.1 -0.1 -0.3 +0.5 -0.2
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 +0.3 +0.1 +0.2 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.4 -0.3 +0.1 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.5 -0.0 -0.3 +0.0
carbon source D-Glucose (C) +0.2 +0.5 -0.2 -0.1 -0.1
r2a control R2A control for volatile experiments +0.3 +0.1 -0.2 -0.3 +0.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.5 +0.2 +0.0 +0.1 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.3 -0.2 +0.6 -0.1
carbon source methyl-beta-D-xylopyranoside (C) -0.1 +0.7 -0.1 +0.1 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.1 -0.0 -0.2 +0.7
stress D-Cycloserine 0.05 mg/ml +0.2 +0.2 +0.2 -0.4 +0.3
r2a control R2A control for volatile experiments +0.2 -0.2 -0.1 +0.2 +0.4
carbon source D-Ribose (C) +0.1 +0.6 +0.2 -0.1 -0.1
carbon source D-Glucose (C) +0.1 +0.5 -0.0 +0.3 +0.1
stress copper (II) chloride 1 mM +0.2 +0.1 -0.0 +0.4 +0.3
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