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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b20716 and SM_b20717 are separated by 88 nucleotides
SM_b20717 and SM_b20718 are separated by 266 nucleotides
SM_b20718 and SM_b20719 are separated by 77 nucleotides
SM_b20719 and SM_b20720 are separated by 65 nucleotides
SM_b20716: SM_b20716 - hypothetical protein, at 1,519,556 to 1,520,452
_b20716
SM_b20717: SM_b20717 - LacI family transcriptional regulator, at 1,520,541 to 1,521,566
_b20717
SM_b20718: SM_b20718 - sugar uptake ABC transporter ATP-binding protein, at 1,521,833 to 1,523,359
_b20718
SM_b20719: SM_b20719 - sugar uptake ABC transporter permease, at 1,523,437 to 1,524,447
_b20719
SM_b20720: SM_b20720 - sugar uptake ABC transporter substrate-binding protein precursor, at 1,524,513 to 1,525,463
_b20720
Group
Condition
SM
_b20716
SM
_b20717
SM
_b20718
SM
_b20719
SM
_b20720
stress
Polymyxin B sulfate 0.00005 mg/ml
-0.9
-0.0
+0.1
-0.6
+0.1
nitrogen source
L-Leucine (N)
-0.0
-0.2
+0.0
+0.1
-0.9
carbon source
D-Arabinose (C)
-0.2
-0.8
-0.0
+0.0
+0.0
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.2
-1.6
+0.4
+0.2
+0.4
nitrogen source
nitrate (N)
-0.0
+0.4
-0.2
-0.8
-0.1
carbon source
L-Histidine (C)
-0.1
-0.5
-0.1
+0.2
-0.1
nutrient
Min media with glucose
+0.3
+0.2
-0.2
-0.4
-0.3
nitrogen source
L-Arginine (N)
+0.3
-0.3
+0.1
-0.2
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.3
-0.1
-0.5
+0.2
stress
1-octen-3-ol 0.6030326667 mM
-0.2
+0.2
+0.1
-0.5
+0.1
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
-0.2
+0.3
-0.0
-0.5
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.1
-1.1
+0.3
+0.6
+0.1
nitrogen source
Cytosine (N)
+0.3
+0.3
-0.1
-0.1
-0.5
pH
LB, pH6
-0.3
+0.5
-0.3
-0.2
+0.1
nitrogen source
L-Histidine (N)
+0.3
+0.2
+0.1
-0.3
-0.3
stress
nitrate 40 mM
+0.1
-0.1
-0.3
+0.5
-0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.2
+0.3
+0.1
+0.2
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+0.4
-0.3
+0.1
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
+0.5
-0.0
-0.3
+0.0
carbon source
D-Glucose (C)
+0.2
+0.5
-0.2
-0.1
-0.1
r2a control
R2A control for volatile experiments
+0.3
+0.1
-0.2
-0.3
+0.4
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.5
+0.2
+0.0
+0.1
-0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.3
-0.2
+0.6
-0.1
carbon source
methyl-beta-D-xylopyranoside (C)
-0.1
+0.7
-0.1
+0.1
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-0.1
-0.0
-0.2
+0.7
stress
D-Cycloserine 0.05 mg/ml
+0.2
+0.2
+0.2
-0.4
+0.3
r2a control
R2A control for volatile experiments
+0.2
-0.2
-0.1
+0.2
+0.4
carbon source
D-Ribose (C)
+0.1
+0.6
+0.2
-0.1
-0.1
carbon source
D-Glucose (C)
+0.1
+0.5
-0.0
+0.3
+0.1
stress
copper (II) chloride 1 mM
+0.2
+0.1
-0.0
+0.4
+0.3
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