Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20697 and SM_b20698 are separated by 151 nucleotidesSM_b20698 and SM_b20699 overlap by 4 nucleotidesSM_b20699 and SM_b20700 are separated by 86 nucleotidesSM_b20700 and SM_b20701 are separated by 76 nucleotides SM_b20697: SM_b20697 - peptidase, arginine utilization protein RocB, at 1,496,855 to 1,498,549 _b20697 SM_b20698: SM_b20698 - transporter, at 1,498,701 to 1,500,353 _b20698 SM_b20699: SM_b20699 - protein secretion protein, at 1,500,350 to 1,501,447 _b20699 SM_b20700: SM_b20700 - hypothetical protein, at 1,501,534 to 1,501,947 _b20700 SM_b20701: SM_b20701 - hypothetical protein, at 1,502,024 to 1,502,776 _b20701
Group Condition SM_b20697 SM_b20698 SM_b20699 SM_b20700 SM_b20701
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.4 -0.5 +0.1 -4.5
carbon source Lactitol (C) +0.1 -0.5 -0.3 -0.1 -1.5
nitrogen source L-Asparagine (N) -0.3 +0.7 +0.2 -0.4 -2.4
stress Chlorite 0.1 mM +0.1 -0.7 +0.1 -0.2 -1.3
carbon source m-Inositol (C) -0.2 +0.0 -0.0 +0.0 -1.8
nitrogen source NAG (N) -0.0 -0.6 -0.3 -0.0 -0.9
nitrogen source L-Histidine (N) +0.0 +0.2 -0.5 -0.2 -1.3
carbon source Mannobiose (C) -0.1 -0.3 -0.2 -0.3 -0.8
carbon source 5-Aminovaleric (C) +0.2 +0.3 -0.1 -0.2 -1.8
carbon source Maltitol (C) -0.0 +0.1 -0.1 +0.0 -1.5
carbon source Fumarate (C) -0.0 +0.1 -0.2 -0.2 -1.3
r2a control R2A control for volatile experiments +0.0 +0.1 -0.2 +0.4 -1.8
nitrogen source Uridine (N) -0.2 +0.2 +0.1 -0.3 -1.2
stress Paraquat dichloride 0.05 mg/ml +0.1 -0.3 -0.1 -0.0 -1.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.2 -0.3 +0.0 +0.1 -1.4
carbon source Mannobiose (C) -0.2 -0.4 -0.1 +0.3 -0.7
r2a control R2A control +0.1 +0.3 -0.1 -0.2 -1.3
nitrogen source L-Glutamine (N) -0.2 +0.3 -0.3 -0.4 -0.5
stress copper (II) chloride 1 mM +0.2 +0.0 -0.2 +0.1 -1.2
nitrogen source Cytosine (N) +0.2 +0.1 -0.2 +0.2 -1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.6 -0.2 -0.1 -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 -0.0 -0.1 -0.2 -0.9
nitrogen source L-Leucine (N) +0.1 +0.7 -0.2 -0.2 -0.7
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.0 +0.3 -0.3 -0.4 +1.0
carbon source D-Glucose (C) -0.0 -0.2 -0.2 +0.2 +1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +0.3 -0.5 -0.6 +1.3
stress Cisplatin 0.001 mg/ml +0.9 +0.4 -0.2 -0.1 +0.2
pH LB, pH8 +0.2 +0.4 +0.4 -0.4 +0.8
stress Nickel (II) chloride 1 mM +0.5 +0.2 -0.5 +0.1 +1.2
stress Polymyxin B sulfate 0.00005 mg/ml +0.2 +0.2 +0.3 -0.2 +1.2
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