Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20581 and SM_b20582 are separated by 144 nucleotidesSM_b20582 and SM_b20583 are separated by 91 nucleotidesSM_b20583 and SM_b20584 are separated by 172 nucleotidesSM_b20584 and SM_b20585 are separated by 209 nucleotides SM_b20581: SM_b20581 - 4-hydroxyphenylpyruvate dioxygenase, at 1,594,321 to 1,596,210 _b20581 SM_b20582: SM_b20582 - LysR family transcriptional regulator, at 1,596,355 to 1,597,275 _b20582 SM_b20583: SM_b20583 - 4-hydroxybenzoate 3-monooxygenase, at 1,597,367 to 1,598,539 _b20583 SM_b20584: SM_b20584 - hypothetical protein, at 1,598,712 to 1,599,374 _b20584 SM_b20585: SM_b20585 - gamma-glutamyltranspeptidase, at 1,599,584 to 1,601,329 _b20585
Group Condition SM_b20581 SM_b20582 SM_b20583 SM_b20584 SM_b20585
carbon source pipercolic (C) -0.1 -0.3 -0.1 -0.7 +0.0
r2a control R2A control for volatile experiments -0.1 -0.2 -0.2 -0.4 -0.0
stress copper (II) chloride 1 mM -0.2 +0.1 -0.0 -0.7 -0.2
stress A22 0.02 mg/ml -0.2 -0.3 -0.1 -0.2 -0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.3 -0.1 -0.1 -0.3 -0.1
carbon source pipercolic (C) -0.0 -0.0 +0.1 -1.0 +0.0
carbon source D-Fructose (C) +0.1 -0.1 -0.3 -0.4 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -0.3 -0.6 +0.2 +0.0
carbon source Methyl beta-D-glucopyranoside (C) -0.0 -0.5 +0.1 +0.1 -0.1
lb LB -0.1 +0.3 -0.1 -0.6 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.2 +0.0 -0.5 -0.1
stress nitrate 40 mM -0.0 +0.1 +0.2 -0.5 +0.1
carbon source Myristic (C) -0.2 -0.1 +0.1 -0.3 +0.2
stress perchlorate 10 mM +0.1 +0.3 -0.4 -0.3 +0.1
carbon source acetate (C) +0.1 -0.2 -0.1 +0.3 -0.3
stress Cisplatin 0.0005 mg/ml -0.3 -0.1 +0.4 +0.1 -0.1
pH LB, pH6 -0.2 +0.3 -0.2 +0.2 -0.2
stress 3-octanone 0.456 mM +0.2 +0.1 +0.2 -0.5 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 -0.1 -0.1 -0.3 +0.6
stress 3-octanone 2.655166667 mM -0.0 -0.1 +0.2 -0.3 +0.3
pH LB, pH8 -0.1 +0.4 -0.0 -0.2 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -0.4 +0.2 +0.4 +0.0
nitrogen source L-Asparagine (N) +0.4 -0.3 +0.1 +0.2 -0.0
pH LB, pH8 -0.0 +0.3 -0.2 +0.3 -0.0
nitrogen source Cytosine (N) +0.2 +0.3 +0.4 -0.4 -0.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.3 -0.4 +0.5 +0.0 -0.1
carbon source methyl-beta-D-xylopyranoside (C) +0.1 -0.2 +0.2 +0.3 +0.2
nitrogen source L-Arginine (N) +0.6 -0.3 -0.1 +0.1 +0.3
nitrogen source Gly-DL-Asp (N) +0.2 +0.3 -0.1 +0.3 +0.1
stress Thallium(I) acetate 0.0025 mg/ml -0.2 +0.4 +0.6 +0.0 +0.3
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