Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20485 and SM_b20486 overlap by 8 nucleotidesSM_b20486 and SM_b20487 overlap by 4 nucleotidesSM_b20487 and SM_b20488 are separated by 2 nucleotidesSM_b20488 and SM_b20489 are separated by 44 nucleotides SM_b20485: SM_b20485 - sugar ABC transporter ATP-binding protein, at 500,933 to 502,462 _b20485 SM_b20486: SM_b20486 - sugar ABC transporter permease, at 502,455 to 503,456 _b20486 SM_b20487: SM_b20487 - sugar ABC transporter permease, at 503,453 to 504,451 _b20487 SM_b20488: SM_b20488 - hypothetical protein, at 504,454 to 505,302 _b20488 SM_b20489: SM_b20489 - carbohydrate kinase, at 505,347 to 506,819 _b20489
Group Condition SM_b20485 SM_b20486 SM_b20487 SM_b20488 SM_b20489
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.3 -0.4 -0.6 -0.4 -0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.3 -0.2 -0.4 -0.5 -0.3
carbon source L-Alanine (C) -0.3 -0.2 -0.1 -0.3 -0.1
carbon source D-Ribose (C) -0.3 -0.2 -0.3 -0.0 -0.1
carbon source acetate (C) -0.2 -0.4 -0.3 +0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 -0.3 -0.5 +0.1 -0.4
carbon source D-Mannose (C) -0.4 -0.1 -0.2 -0.1 +0.2
stress Cisplatin 0.0005 mg/ml -0.1 -0.2 +0.2 -0.3 -0.3
stress copper (II) chloride 1 mM -0.3 -0.1 -0.2 -0.2 +0.2
stress copper (II) chloride 1 mM +0.1 +0.1 +0.1 -0.4 -0.4
stress Aluminum chloride -0.3 +0.3 -0.2 -0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.2 -0.4 -0.2 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.4 -0.2 +0.0 -0.1
stress Paraquat dichloride 0.2 mg/ml -0.8 +0.1 +0.3 -0.0 +0.2
stress 3-octanone 0.456 mM +0.1 -0.2 -0.3 +0.3 +0.1
nitrogen source NAG (N) +0.1 -0.1 -0.4 +0.3 +0.1
carbon source methyl 3-keto-a-D-glucopyranoside (C) +0.1 -0.1 -0.3 +0.2 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.1 -0.0 +0.2 +0.3
nitrogen source L-Arginine (N) +0.2 +0.1 +0.1 -0.5 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 +0.1 +0.2 +0.1 +0.5
nitrogen source D-Glucosamine Hydrochloride (N) +0.3 +0.1 -0.3 +0.4 -0.1
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM -0.1 -0.2 +0.1 +0.1 +0.5
nitrogen source L-Serine (N) +0.2 +0.1 -0.3 +0.3 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.2 +0.3 -0.3 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.3 +0.2 +0.1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -0.1 +0.0 +1.0 +0.0
r2a control R2A control for volatile experiments +0.1 -0.1 +0.3 +0.4 +0.3
nitrogen source L-Asparagine (N) +0.6 +0.1 +0.2 -0.1 +0.2
carbon source D-Arabinose (C) +0.2 +0.1 +0.4 +0.4 +0.1
r2a control R2A control for volatile experiments +0.2 +0.3 +0.2 +0.4 +0.2
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