Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20480 and SM_b20481 are separated by 123 nucleotidesSM_b20481 and SM_b20482 are separated by 1 nucleotidesSM_b20482 and SM_b20483 are separated by 7 nucleotidesSM_b20483 and SM_b20484 are separated by 273 nucleotides SM_b20480: SM_b20480 - transcriptional regulator, at 494,013 to 494,795 _b20480 SM_b20481: SM_b20481 - asparagine synthetase (glutamine amidotransferase) protein, at 494,919 to 496,694 _b20481 SM_b20482: SM_b20482 - hypothetical protein, at 496,696 to 498,483 _b20482 SM_b20483: SM_b20483 - catabolite repressor protein, at 498,491 to 499,561 _b20483 SM_b20484: SM_b20484 - sugar ABC transporter substrate-binding protein, at 499,835 to 500,827 _b20484
Group Condition SM_b20480 SM_b20481 SM_b20482 SM_b20483 SM_b20484
carbon source Xylobiose (C) -0.3 -0.1 -0.1 -1.6 -0.2
carbon source Xylobiose (C) -0.3 -0.1 -0.2 -1.4 -0.2
carbon source L-Fucose (C) +0.1 -0.0 +0.0 -1.5 -0.1
carbon source Lactitol (C) -0.6 -0.0 +0.2 -0.6 -0.3
stress Aluminum chloride -0.4 -0.1 -0.5 -0.2 -0.1
stress Cisplatin 0.001 mg/ml -0.6 +0.1 -0.1 -0.5 -0.3
carbon source L-Histidine (C) -0.1 -0.1 -0.0 -1.1 +0.1
carbon source pipercolic (C) -0.1 -0.1 -0.1 -0.7 -0.3
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 +0.0 -0.1 -0.5 -0.4
dmso control DMSO control -0.1 +0.1 -0.1 -0.2 -0.8
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.2 +0.1 -0.2 -0.0 -0.7
carbon source L-Alanine (C) -0.3 -0.2 -0.2 -0.5 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 +0.2 -0.1 -0.4 -0.3
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.5 -0.1 +0.0 -0.5 +0.1
carbon source L-Glutamine (C) -0.2 +0.0 +0.2 -0.9 -0.0
nitrogen source nitrate (N) -0.0 +0.2 -0.1 -0.7 -0.3
carbon source L-Alanine (C) -0.1 +0.1 +0.1 -0.8 -0.2
stress Nickel (II) chloride 1 mM -0.9 +0.1 -0.1 +0.1 +0.1
r2a control R2A control for volatile experiments +0.2 +0.1 +0.1 -0.2 -0.8
carbon source L-Proline (C) -0.3 -0.0 +0.2 -0.6 +0.1
carbon source D-Maltose (C) -0.2 -0.1 +0.2 -0.7 +0.3
nitrogen source L-Histidine (N) -0.6 +0.3 +0.2 -0.3 +0.0
carbon source D-Arabinose (C) -0.0 -0.0 +0.1 -0.6 +0.5
stress perchlorate 10 mM +0.6 +0.1 -0.0 -0.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.2 +0.1 -0.4 +0.5
nitrogen source Gly-DL-Asp (N) +0.0 -0.0 +0.4 +0.3 -0.5
carbon source Maltitol (C) +0.1 +0.0 -0.1 +0.7 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +0.1 +0.3 +0.7 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.3 -0.0 +0.1 +0.8
carbon source Uridine (C) -0.3 -0.1 +0.2 +1.4 +0.3
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