Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20432 and SM_b20433 overlap by 4 nucleotidesSM_b20433 and SM_b20434 are separated by 44 nucleotidesSM_b20434 and SM_b20435 are separated by 19 nucleotidesSM_b20435 and SM_b20436 are separated by 397 nucleotides SM_b20432: SM_b20432 - threonine dehydratase, at 446,349 to 447,353 _b20432 SM_b20433: SM_b20433 - ectoine utilization protein EutC, at 447,350 to 448,339 _b20433 SM_b20434: SM_b20434 - hydrolasepeptidase, at 448,384 to 449,565 _b20434 SM_b20435: SM_b20435 - hypothetical protein, at 449,585 to 450,580 _b20435 SM_b20436: SM_b20436 - nitrate transporter protein, at 450,978 to 452,252 _b20436
Group Condition SM_b20432 SM_b20433 SM_b20434 SM_b20435 SM_b20436
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 -2.1 -0.1 +0.1 +0.2
lb LB -0.3 -0.6 +0.0 -0.6 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -1.4 +0.2 -0.3 -0.0
nitrogen source L-Leucine (N) -0.0 -1.1 -0.1 +0.0 +0.0
stress perchlorate 10 mM -0.3 -0.3 -0.1 -0.5 +0.1
nitrogen source Cytosine (N) -0.3 -0.7 -0.2 +0.3 -0.1
carbon source NAG (C) -0.0 -0.7 -0.1 +0.1 -0.1
nutrient Min media with glucose -0.2 -0.8 +0.0 +0.1 +0.1
nitrogen source L-Serine (N) -0.0 -0.6 -0.1 +0.3 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.3 +0.1 -0.5 +0.3
nitrogen source L-Histidine (N) -0.1 -0.3 -0.3 +0.2 -0.1
carbon source methyl 3-keto-a-D-glucopyranoside (C) +0.2 -0.5 -0.3 +0.1 +0.0
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 -0.5 -0.1 +0.5 -0.2
carbon source Sucrose (C) -0.2 -0.4 +0.1 +0.3 -0.0
stress Nickel (II) chloride 1 mM +0.1 -0.5 +0.1 +0.2 -0.2
r2a control R2A control for volatile experiments +0.1 -0.6 +0.1 +0.1 +0.2
nitrogen source L-Arginine (N) +0.5 -0.5 -0.2 +0.1 -0.0
stress Paraquat dichloride 0.2 mg/ml -0.4 +0.6 -0.1 +0.0 +0.0
stress Aluminum chloride -0.1 -0.5 +0.5 +0.3 +0.1
stress 3-octanone 2.655166667 mM +0.1 +0.6 -0.2 -0.1 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -0.2 +0.3 -0.1 +0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 +0.9 +0.0 -0.2 -0.2
stress 3-octanone 0.456 mM +0.1 +0.6 +0.1 -0.2 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.6 +0.1 -0.0 +0.2
carbon source pipercolic (C) +0.1 +0.4 -0.2 +0.4 +0.1
carbon source D-Xylose (C) -0.2 +0.5 +0.0 +0.3 +0.2
stress 1-octen-3-ol 0.6030326667 mM +0.2 +0.5 -0.0 +0.2 -0.0
r2a control R2A control +0.2 +0.7 -0.1 +0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.5 +0.2 -0.0 -0.0
stress Polymyxin B sulfate 0.00005 mg/ml -0.3 +0.9 +0.3 -0.1 +0.3
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