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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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500 nt
SM_b20325 and SM_b20326 are separated by 87 nucleotides
SM_b20326 and SM_b20327 overlap by 1 nucleotides
SM_b20327 and SM_b20328 are separated by 9 nucleotides
SM_b20328 and SM_b20329 are separated by 165 nucleotides
SM_b20325: SM_b20325 - ABC transporter for D-trehalose/D-maltose/sucrose, substrate-binding component (ThuE)
(from data)
, at 328,098 to 329,369
_b20325
SM_b20326: SM_b20326 - ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF)
(from data)
, at 329,457 to 330,443
_b20326
SM_b20327: SM_b20327 - ABC transporter for D-trehalose/D-maltose/sucrose, permease component 2 (ThuG)
(from data)
, at 330,443 to 331,273
_b20327
SM_b20328: SM_b20328 - ABC transporter for D-trehalose/D-maltose/sucrose, ATPase component (ThuK)
(from data)
, at 331,283 to 332,311
_b20328
SM_b20329: SM_b20329 - required for glucoside 3-dehydrogenase activity on raffinose or trehalose (thuA) (EC 1.1.99.13)
(from data)
, at 332,477 to 333,289
_b20329
Group
Condition
SM
_b20325
SM
_b20326
SM
_b20327
SM
_b20328
SM
_b20329
carbon source
palatinose (C)
-5.0
-4.4
-3.9
-3.8
-5.0
carbon source
palatinose (C)
-4.2
-4.8
-4.8
-3.8
-4.2
carbon source
D-Leucrose (C)
-3.4
-3.8
-3.3
-3.6
-5.1
carbon source
Maltitol (C)
-3.8
-4.5
-3.1
-2.5
-4.9
carbon source
D-Leucrose (C)
-3.5
-3.9
-3.1
-2.7
-5.1
carbon source
Maltitol (C)
-3.7
-3.7
-3.7
-2.6
-4.3
carbon source
D-Trehalose (C)
-2.9
-2.6
-3.6
-3.4
-5.1
carbon source
D-Trehalose (C)
-2.4
-2.7
-3.0
-2.6
-3.7
carbon source
D-Trehalose (C)
-2.5
-2.4
-2.4
-2.4
-3.1
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-3.1
-4.5
-2.0
-0.1
-3.0
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-3.0
-2.7
-1.8
-0.1
-3.1
carbon source
D-Raffinose (C)
-0.6
-0.5
-0.6
-0.4
-2.0
carbon source
Sucrose (C)
-0.7
-0.8
-0.8
-0.5
+0.2
carbon source
Sucrose (C)
-0.6
-0.6
-0.5
-0.6
+0.1
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
-0.2
-0.2
-0.0
-0.3
-0.9
stress
A22 0.02 mg/ml
+0.1
-0.2
+0.0
-0.4
-0.9
carbon source
D-Galactose (C)
-0.2
+0.0
-0.2
-0.2
-0.7
carbon source
D-Mannitol (C)
-0.0
-0.5
-0.1
+0.1
-0.8
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
+0.1
-0.2
-0.1
-0.1
-0.7
stress
Cisplatin 0.0005 mg/ml
+0.1
-0.2
-0.2
-0.2
-0.6
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.0
-0.4
-0.5
-0.1
+0.2
carbon source
D-Maltose (C)
-0.6
-0.8
-0.4
-0.6
+1.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.1
-0.4
-0.6
+0.1
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.6
+0.0
+0.3
-0.4
+0.1
stress
Paraquat dichloride 0.3 mg/ml
-0.1
+0.2
+0.4
-0.6
-0.0
carbon source
D-Sorbitol (C)
+0.4
+0.5
+0.0
+0.0
-0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.8
-0.1
-0.2
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
+1.0
-0.3
+0.3
-0.2
stress
Cisplatin 0.001 mg/ml
+0.1
+0.7
+0.3
-0.1
-0.1
nitrogen source
L-Arginine (N)
+0.1
+0.5
+0.1
+0.3
+0.5
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