Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20325 and SM_b20326 are separated by 87 nucleotidesSM_b20326 and SM_b20327 overlap by 1 nucleotidesSM_b20327 and SM_b20328 are separated by 9 nucleotidesSM_b20328 and SM_b20329 are separated by 165 nucleotides SM_b20325: SM_b20325 - ABC transporter for D-trehalose/D-maltose/sucrose, substrate-binding component (ThuE) (from data), at 328,098 to 329,369 _b20325 SM_b20326: SM_b20326 - ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF) (from data), at 329,457 to 330,443 _b20326 SM_b20327: SM_b20327 - ABC transporter for D-trehalose/D-maltose/sucrose, permease component 2 (ThuG) (from data), at 330,443 to 331,273 _b20327 SM_b20328: SM_b20328 - ABC transporter for D-trehalose/D-maltose/sucrose, ATPase component (ThuK) (from data), at 331,283 to 332,311 _b20328 SM_b20329: SM_b20329 - required for glucoside 3-dehydrogenase activity on raffinose or trehalose (thuA) (EC 1.1.99.13) (from data), at 332,477 to 333,289 _b20329
Group Condition SM_b20325 SM_b20326 SM_b20327 SM_b20328 SM_b20329
carbon source palatinose (C) -5.0 -4.4 -3.9 -3.8 -5.0
carbon source palatinose (C) -4.2 -4.8 -4.8 -3.8 -4.2
carbon source D-Leucrose (C) -3.4 -3.8 -3.3 -3.6 -5.1
carbon source Maltitol (C) -3.8 -4.5 -3.1 -2.5 -4.9
carbon source D-Leucrose (C) -3.5 -3.9 -3.1 -2.7 -5.1
carbon source Maltitol (C) -3.7 -3.7 -3.7 -2.6 -4.3
carbon source D-Trehalose (C) -2.9 -2.6 -3.6 -3.4 -5.1
carbon source D-Trehalose (C) -2.4 -2.7 -3.0 -2.6 -3.7
carbon source D-Trehalose (C) -2.5 -2.4 -2.4 -2.4 -3.1
carbon source methyl 3-keto-a-D-glucopyranoside (C) -3.1 -4.5 -2.0 -0.1 -3.0
carbon source methyl 3-keto-a-D-glucopyranoside (C) -3.0 -2.7 -1.8 -0.1 -3.1
carbon source D-Raffinose (C) -0.6 -0.5 -0.6 -0.4 -2.0
carbon source Sucrose (C) -0.7 -0.8 -0.8 -0.5 +0.2
carbon source Sucrose (C) -0.6 -0.6 -0.5 -0.6 +0.1
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.2 -0.2 -0.0 -0.3 -0.9
stress A22 0.02 mg/ml +0.1 -0.2 +0.0 -0.4 -0.9
carbon source D-Galactose (C) -0.2 +0.0 -0.2 -0.2 -0.7
carbon source D-Mannitol (C) -0.0 -0.5 -0.1 +0.1 -0.8
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.1 -0.2 -0.1 -0.1 -0.7
stress Cisplatin 0.0005 mg/ml +0.1 -0.2 -0.2 -0.2 -0.6
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.0 -0.4 -0.5 -0.1 +0.2
carbon source D-Maltose (C) -0.6 -0.8 -0.4 -0.6 +1.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 -0.4 -0.6 +0.1 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 +0.0 +0.3 -0.4 +0.1
stress Paraquat dichloride 0.3 mg/ml -0.1 +0.2 +0.4 -0.6 -0.0
carbon source D-Sorbitol (C) +0.4 +0.5 +0.0 +0.0 -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.8 -0.1 -0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 +1.0 -0.3 +0.3 -0.2
stress Cisplatin 0.001 mg/ml +0.1 +0.7 +0.3 -0.1 -0.1
nitrogen source L-Arginine (N) +0.1 +0.5 +0.1 +0.3 +0.5
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