Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20313 and SM_b20314 overlap by 32 nucleotidesSM_b20314 and SM_b20315 are separated by 390 nucleotidesSM_b20315 and SM_b20316 are separated by 79 nucleotidesSM_b20316 and SM_b20317 are separated by 117 nucleotides SM_b20313: SM_b20313 - glycerone kinase, at 314,728 to 315,411 _b20313 SM_b20314: SM_b20314 - glycerone kinase, at 315,380 to 316,372 _b20314 SM_b20315: SM_b20315 - sugar ABC transporter permease, at 316,763 to 317,749 _b20315 SM_b20316: SM_b20316 - sugar ABC transporter substrate-binding protein, at 317,829 to 318,830 _b20316 SM_b20317: SM_b20317 - sugar ABC transporter ATP-binding protein, at 318,948 to 320,498 _b20317
Group Condition SM_b20313 SM_b20314 SM_b20315 SM_b20316 SM_b20317
carbon source acetate (C) -2.7 -1.4 +0.0 -0.1 -0.3
nitrogen source L-Arginine (N) -0.9 -1.2 +0.2 -0.5 -1.1
nitrogen source L-Histidine (N) -0.8 -0.9 +0.1 -0.5 -1.1
carbon source L-Fucose (C) -1.6 -1.0 -0.0 -0.3 -0.1
carbon source methyl-beta-D-xylopyranoside (C) -1.4 -1.0 -0.0 +0.0 -0.3
carbon source D-Arabinose (C) -1.1 -1.1 -0.1 +0.1 -0.0
carbon source 5-Aminovaleric (C) -0.9 -0.8 -0.1 +0.1 -0.7
carbon source Myristic (C) -1.3 -0.9 +0.1 +0.0 -0.1
carbon source Lactitol (C) -1.0 -0.9 +0.0 -0.1 -0.1
nitrogen source Gly-DL-Asp (N) -0.7 -0.8 -0.2 -0.5 +0.1
carbon source D-Glucose (C) -0.8 -0.8 -0.1 -0.1 -0.2
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.8 -0.9 +0.0 +0.1 -0.4
nutrient L-Lysine -0.9 -0.8 +0.1 -0.1 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -0.7 -0.5 -0.1 +0.1
carbon source D-Glucose (C) -0.5 -0.7 +0.1 -0.6 -0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -1.0 -0.8 +0.0 -0.1 +0.0
nutrient L-Histidine -1.2 -0.6 -0.1 +0.2 -0.1
carbon source acetate (C) -1.4 -0.8 +0.2 +0.3 +0.1
carbon source D-Glucose (C) -0.6 -0.7 +0.2 -0.1 -0.3
nitrogen source L-Glutamine (N) -1.2 -0.1 +0.3 -0.5 +0.0
nitrogen source L-Asparagine (N) -0.5 -0.7 +0.3 -0.6 +0.1
carbon source 5-Aminovaleric (C) -0.8 -0.8 +0.2 +0.2 -0.2
carbon source D-Salicin (C) -1.2 -0.3 +0.2 -0.2 +0.2
nitrogen source NAG (N) -0.7 -0.6 +0.3 -0.4 +0.1
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.9 -0.6 -0.1 -0.6 -0.0
stress Chlorite 0.1 mM +0.6 +0.6 -0.2 -0.3 -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 +0.3 -0.5 +0.7 +0.3
pH LB, pH6 +0.7 +0.6 -0.1 -0.4 +0.1
stress perchlorate 10 mM +0.7 +0.7 -0.2 +0.0 +0.3
pH LB, pH6 +1.3 +1.0 -0.2 -0.5 +0.3
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