Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20297 and SM_b20298 overlap by 4 nucleotidesSM_b20298 and SM_b20299 are separated by 13 nucleotidesSM_b20299 and SM_b20300 are separated by 336 nucleotidesSM_b20300 and SM_b20301 overlap by 4 nucleotides SM_b20297: SM_b20297 - permease, at 303,470 to 304,750 _b20297 SM_b20298: SM_b20298 - hypothetical protein, at 304,747 to 305,682 _b20298 SM_b20299: SM_b20299 - N-acetylneuraminate lyase, at 305,696 to 306,595 _b20299 SM_b20300: SM_b20300 - adenylate cyclase, at 306,932 to 308,845 _b20300 SM_b20301: SM_b20301 - dehydgrogenase, at 308,842 to 309,972 _b20301
Group Condition SM_b20297 SM_b20298 SM_b20299 SM_b20300 SM_b20301
carbon source L-Fucose (C) -0.1 -0.2 -0.1 -0.3 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -1.1 -0.0 -0.3 +0.2
stress copper (II) chloride 1 mM +0.0 -0.8 -0.2 -0.0 +0.1
stress Nickel (II) chloride 1 mM -0.0 -0.7 +0.1 -0.1 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 +0.2 -0.2 +0.1 -0.1
r2a-hepes control R2A-HEPES control for volatile experiments -0.4 +0.3 -0.1 +0.1 -0.0
r2a control R2A control for volatile experiments -0.0 -0.0 -0.5 +0.3 +0.1
nitrogen source NAG (N) -0.2 -0.2 +0.1 +0.0 +0.3
stress Cisplatin 0.001 mg/ml +0.2 -0.4 -0.1 +0.1 +0.1
carbon source acetate (C) -0.1 +0.4 -0.1 -0.0 -0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.3 +0.1 -0.2 +0.1 +0.2
r2a control R2A control for volatile experiments -0.3 +0.2 -0.1 +0.1 +0.2
stress Chlorite 0.1 mM -0.1 +0.1 +0.3 +0.1 -0.2
stress 3-octanone 2.655166667 mM +0.2 -0.3 +0.3 -0.0 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.3 +0.3 -0.0 +0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.1 +0.4 -0.5 +0.3 +0.0
nitrogen source L-Arginine (N) +0.0 -0.2 -0.1 +0.3 +0.3
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM -0.2 -0.0 +0.3 +0.1 +0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 +0.5 -0.1 +0.0 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.5 +0.4 +0.0 -0.5
r2a control R2A control for volatile experiments -0.2 +0.3 +0.0 +0.2 +0.2
stress Polymyxin B sulfate 0.00005 mg/ml -0.1 +0.5 +0.2 +0.1 -0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 +0.5 -0.1 +0.0 +0.3
stress 3-octanone 0.456 mM -0.3 +0.5 +0.1 +0.0 +0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.1 +0.6 -0.2 +0.2 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 +0.4 +0.1 -0.1 +0.3
nitrogen source L-Asparagine (N) +0.1 +0.5 +0.2 -0.2 +0.2
nitrogen source L-Serine (N) -0.1 +0.4 +0.3 +0.1 +0.1
nutrient L-Histidine +0.2 +0.4 +0.2 +0.2 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.4 +0.0 -0.1 +0.4
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