Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20264 and SM_b20265 are separated by 12 nucleotidesSM_b20265 and SM_b20266 overlap by 8 nucleotidesSM_b20266 and SM_b20267 are separated by 0 nucleotidesSM_b20267 and SM_b20268 are separated by 14 nucleotides SM_b20264: SM_b20264 - amino acid ABC transporter permease, at 269,391 to 270,056 _b20264 SM_b20265: SM_b20265 - amino acid ABC transporter permease, at 270,069 to 270,722 _b20265 SM_b20266: SM_b20266 - amino acid ABC transporter ATP-binding protein, at 270,715 to 271,437 _b20266 SM_b20267: SM_b20267 - D-amino acid dehydrogenase, at 271,438 to 272,679 _b20267 SM_b20268: SM_b20268 - hydroxyproline-2-epimerase, at 272,694 to 273,695 _b20268
Group Condition SM_b20264 SM_b20265 SM_b20266 SM_b20267 SM_b20268
nitrogen source L-Asparagine (N) -0.3 +0.1 -0.1 -1.3 -0.4
carbon source L-Proline (C) -0.5 -0.6 -0.6 -0.2 +0.0
stress Chlorite 0.1 mM +0.3 -1.0 +0.1 +1.0 -1.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.8 -0.4 -1.8 +0.3
carbon source D-Xylose (C) +0.2 -0.3 +0.1 -0.7 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.0 +0.3 -1.5 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 -0.1 -0.2 -0.8 -0.3
carbon source acetate (C) +0.2 +0.1 +0.1 -0.9 -0.2
carbon source Uridine (C) +0.3 -0.1 +0.2 -0.6 -0.2
stress Polymyxin B sulfate 0.00005 mg/ml -0.2 -0.6 -0.1 +1.5 -1.0
carbon source D-Mannose (C) +0.1 -0.5 +0.2 +0.3 -0.3
lb LB +0.1 +0.5 +0.3 -0.5 -0.4
nitrogen source D-Glucosamine Hydrochloride (N) +0.4 +0.4 -0.2 -0.6 +0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.6 +0.2 -0.2 -0.3 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.6 +0.4 -1.1 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 -0.2 +0.2 +0.3 -0.4
r2a control R2A control for volatile experiments +0.2 -0.4 -0.1 +0.7 +0.2
stress Paraquat dichloride 0.05 mg/ml +0.4 +0.6 +0.2 -0.1 -0.5
stress 1-octen-3-ol 0.6030326667 mM -0.1 +0.3 -0.2 +0.5 +0.4
nutrient Min media with glucose +0.4 +0.7 +0.3 -0.3 -0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.1 +0.3 -0.1 +0.8 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +0.6 -0.2 +0.0 +0.1
r2a-hepes control R2A-HEPES control for volatile experiments +0.3 +0.1 +0.2 +0.8 -0.1
r2a control R2A control for volatile experiments +0.4 +0.1 +0.1 +0.9 -0.1
stress Aluminum chloride +0.4 +0.2 +0.2 +0.9 -0.2
pH LB, pH6 +0.0 +0.2 +0.5 +0.4 +0.4
r2a control R2A control for volatile experiments +0.5 +0.3 +0.3 +0.3 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.7 +0.4 -0.1 +0.3
stress D-Cycloserine 0.05 mg/ml +0.3 +0.8 +0.1 +0.6 +0.2
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.6 +0.2 +0.2 +1.1 +0.0
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