Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20257 and SM_b20258 are separated by 104 nucleotidesSM_b20258 and SM_b20259 are separated by 120 nucleotidesSM_b20259 and SM_b20260 are separated by 47 nucleotidesSM_b20260 and SM_b20261 are separated by 63 nucleotides SM_b20257: SM_b20257 - adenylate cyclase, at 262,074 to 263,132 _b20257 SM_b20258: SM_b20258 - transcriptional regulator, at 263,237 to 263,947 _b20258 SM_b20259: SM_b20259 - dihydrodipicolinate synthase, at 264,068 to 265,030 _b20259 SM_b20260: SM_b20260 - hypothetical protein, at 265,078 to 265,470 _b20260 SM_b20261: SM_b20261 - malate dehydrogenase, at 265,534 to 266,571 _b20261
Group Condition SM_b20257 SM_b20258 SM_b20259 SM_b20260 SM_b20261
carbon source pipercolic (C) +0.1 -3.0 +0.2 +0.3 -1.5
carbon source pipercolic (C) +0.2 -4.2 -0.0 +0.7 -0.5
stress Sisomicin 0.004 mg/ml -0.4 -0.8 -0.4 -1.3 -0.4
nutrient Min media with glucose +0.1 -1.5 -0.0 -0.8 -0.7
stress Thallium(I) acetate 0.0025 mg/ml -0.6 -1.3 -0.1 -0.8 +0.4
stress nitrate 40 mM -0.6 -1.1 -0.2 -0.7 +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -2.7 +0.2 +0.6 +0.1
stress Paraquat dichloride 0.3 mg/ml -0.6 -0.6 -0.3 -1.0 +0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.6 +0.4 -2.4 +1.2
stress Paraquat dichloride 0.2 mg/ml -0.3 -1.8 -0.1 -0.2 +0.8
nitrogen source L-Histidine (N) +0.3 -1.0 -0.0 -1.0 +0.2
pH LB, pH8 -0.0 -1.2 -0.0 +0.5 -0.8
stress copper (II) chloride 1 mM -0.3 -0.5 -0.3 -1.6 +1.2
stress Thallium(I) acetate 0.001 mg/ml -0.5 -1.0 -0.1 -0.1 +1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 -0.7 +0.2 -0.9 +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.3 -0.3 +0.7 +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.9 +0.0 -0.7 +1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.0 -0.2 +1.2 +1.5
pH LB, pH6 -0.1 -0.1 -0.1 -1.8 +1.9
carbon source L-Lysine (C) +0.3 -1.3 +0.1 +0.2 +0.8
nitrogen source L-Leucine (N) -0.6 -0.7 +0.1 +1.1 +0.2
stress Polymyxin B sulfate 0.00005 mg/ml -0.2 -1.4 +0.5 +1.3 +0.3
carbon source 5-Aminovaleric (C) +0.7 -1.0 +0.2 +0.7 +0.1
stress D-Cycloserine 0.05 mg/ml +0.6 -1.2 +0.3 +0.4 +1.1
pH LB, pH6 +0.1 -0.6 +0.1 +0.8 +1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 -0.6 +0.3 +0.7 +1.1
nitrogen source L-Arginine (N) +1.0 +0.2 -0.0 +1.5 -0.3
carbon source L-Proline (C) -0.2 +3.7 +0.0 +0.2 +0.1
carbon source L-Alanine (C) +0.2 +9.1 +0.1 +0.4 -0.1
carbon source L-Alanine (C) -0.1 +9.3 -0.3 +0.9 +0.4
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