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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b20250 and SM_b20251 are separated by 71 nucleotides
SM_b20251 and SM_b20252 overlap by 88 nucleotides
SM_b20252 and SM_b20253 are separated by 46 nucleotides
SM_b20253 and SM_b20254 are separated by 208 nucleotides
SM_b20250: SM_b20250 - hypothetical protein, at 256,338 to 256,937
_b20250
SM_b20251: SM_b20251 - hypothetical protein, at 257,009 to 257,971
_b20251
SM_b20252: SM_b20252 - hypothetical protein, at 257,884 to 259,248
_b20252
SM_b20253: SM_b20253 - hypothetical protein, at 259,295 to 260,200
_b20253
SM_b20254: SM_b20254 - hypothetical protein, at 260,409 to 260,684
_b20254
Group
Condition
SM
_b20250
SM
_b20251
SM
_b20252
SM
_b20253
SM
_b20254
carbon source
5-Aminovaleric (C)
-1.2
-1.2
-0.0
+0.1
N.D.
carbon source
m-Inositol (C)
-0.4
-0.9
-0.0
+0.1
N.D.
stress
Cisplatin 0.001 mg/ml
-0.8
-0.2
-0.1
+0.0
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.5
-0.6
+0.0
+0.0
N.D.
carbon source
D-Glucose (C)
-0.3
-0.3
-0.2
-0.1
N.D.
stress
1-octen-3-ol 0.4933903333 mM
-0.1
-0.4
-0.1
-0.3
N.D.
carbon source
D-Glucose (C)
-0.4
-0.4
+0.1
-0.1
N.D.
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
-0.1
-0.5
+0.1
-0.2
N.D.
nitrogen source
NAG (N)
-0.6
-0.1
-0.1
-0.0
N.D.
carbon source
acetate (C)
-0.4
-0.3
+0.1
-0.2
N.D.
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.4
-0.1
-0.2
+0.1
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
+0.6
-0.7
-0.1
N.D.
carbon source
L-Alanine (C)
-0.5
-0.1
-0.1
+0.1
N.D.
stress
1-octen-3-ol 0.6030326667 mM
-0.3
-0.3
-0.1
+0.1
N.D.
pH
LB, pH8
-0.7
+0.0
+0.2
-0.0
N.D.
nitrogen source
L-Serine (N)
-0.5
-0.2
+0.1
+0.2
N.D.
carbon source
Protocatechuic Acid (C)
-0.3
-0.3
+0.1
+0.1
N.D.
nitrogen source
nitrate (N)
-0.3
-0.2
+0.2
-0.1
N.D.
carbon source
D-Ribose (C)
+0.1
-0.4
-0.1
+0.2
N.D.
nitrogen source
L-Asparagine (N)
-0.8
+0.4
+0.1
+0.1
N.D.
carbon source
L-Arabinose (C)
-0.5
+0.1
+0.1
+0.1
N.D.
stress
copper (II) chloride 1 mM
-0.4
+0.5
-0.1
-0.0
N.D.
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.3
-0.4
-0.1
+0.2
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.5
-0.1
-0.1
N.D.
nitrogen source
Cytosine (N)
-0.4
+0.4
+0.0
+0.1
N.D.
r2a control
R2A control for volatile experiments
+0.4
-0.4
+0.2
+0.1
N.D.
stress
Aluminum chloride
-0.1
+0.5
+0.2
-0.0
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.6
-0.2
+0.1
+0.0
N.D.
stress
perchlorate 10 mM
-0.1
+0.5
+0.2
+0.1
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
+0.5
+0.3
+0.1
N.D.
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