Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20199 and SM_b20200 are separated by 2 nucleotidesSM_b20200 and SM_b20201 are separated by 10 nucleotidesSM_b20201 and SM_b20202 are separated by 10 nucleotidesSM_b20202 and SM_b20203 are separated by 101 nucleotides SM_b20199: SM_b20199 - fructose-1,6-bisphosphate aldolase, at 207,260 to 208,339 _b20199 SM_b20200: SM_b20200 - transketolase, at 208,342 to 210,426 _b20200 SM_b20201: SM_b20201 - phosphoribulokinase, at 210,437 to 211,306 _b20201 SM_b20202: SM_b20202 - fructose-1,6-bisphosphatase, at 211,317 to 212,366 _b20202 SM_b20203: SM_b20203 - transcriptional regulator, at 212,468 to 213,409 _b20203
Group Condition SM_b20199 SM_b20200 SM_b20201 SM_b20202 SM_b20203
carbon source L-Proline (C) -3.7 -5.1 +0.6 +0.6 N.D.
carbon source pipercolic (C) -2.8 -3.2 -0.6 -0.5 N.D.
carbon source pipercolic (C) -1.9 -3.4 -0.2 -0.5 N.D.
carbon source L-Lysine (C) -0.7 -0.9 -0.1 -0.3 N.D.
carbon source L-Lysine (C) +0.1 -0.6 -0.3 -0.3 N.D.
carbon source L-Lysine (C) -0.4 -1.0 +0.1 +0.1 N.D.
nitrogen source L-Histidine (N) -0.1 -0.3 -0.0 -0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -0.1 -0.3 -0.0 N.D.
nitrogen source L-Leucine (N) +0.0 -0.3 +0.0 -0.6 N.D.
nitrogen source Gelatin (N) +0.1 -0.1 -0.4 -0.4 N.D.
nitrogen source Cytosine (N) -0.3 -0.1 +0.0 -0.4 N.D.
nutrient Min media with glucose -0.5 -0.2 +0.2 -0.1 N.D.
carbon source L-Histidine (C) -0.3 -0.3 +0.2 -0.0 N.D.
stress Aluminum chloride +0.1 +0.1 -0.3 -0.3 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 +0.4 -0.1 -0.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.3 +0.1 +0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.5 +0.0 +0.4 N.D.
stress D-Cycloserine 0.05 mg/ml +0.3 -0.2 -0.1 -0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.1 +0.2 -0.2 N.D.
stress nitrate 40 mM +0.4 +0.3 -0.2 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 +0.3 +0.3 -0.4 N.D.
carbon source Lactitol (C) -0.1 -0.2 +0.4 +0.1 N.D.
lb LB -0.3 +0.0 +0.4 +0.2 N.D.
carbon source methyl 3-keto-a-D-glucopyranoside (C) +0.4 -0.3 -0.1 +0.3 N.D.
carbon source D-Mannitol (C) -0.1 -0.1 +0.3 +0.3 N.D.
stress Cisplatin 0.0005 mg/ml +0.5 +0.2 +0.1 -0.3 N.D.
nitrogen source L-Asparagine (N) +0.7 +0.2 +0.0 -0.3 N.D.
stress copper (II) chloride 1 mM +0.5 +0.2 -0.0 +0.0 N.D.
carbon source Lactulose (C) +0.1 +0.4 +0.1 +0.2 N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.4 +0.3 +0.0 +0.0 N.D.
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