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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b20186 and SM_b20194 are separated by 311 nucleotides
SM_b20194 and SM_b20195 are separated by 3 nucleotides
SM_b20195 and SM_b20196 overlap by 4 nucleotides
SM_b20196 and SM_b20197 are separated by 11 nucleotides
SM_b20186: SM_b20186 - glutathione-dependent formaldehyde-activating protein, at 202,255 to 202,824
_b20186
SM_b20194: SM_b20194 - hypothetical protein, at 203,136 to 203,702
_b20194
SM_b20195: SM_b20195 - pentose-5-phosphate-3-epimerase, at 203,706 to 204,392
_b20195
SM_b20196: SM_b20196 - CbbX protein, at 204,389 to 205,324
_b20196
SM_b20197: SM_b20197 - ribulose-1,5-bisphosphate carboxylase small subunit (EC 4.1.1.39)
(from data)
, at 205,336 to 205,725
_b20197
Group
Condition
SM
_b20186
SM
_b20194
SM
_b20195
SM
_b20196
SM
_b20197
carbon source
L-Proline (C)
+0.0
+0.1
+0.1
-4.9
-5.5
carbon source
pipercolic (C)
+0.1
+0.2
-0.1
-3.8
-5.3
carbon source
pipercolic (C)
+0.1
+0.1
-0.0
-3.9
-4.7
carbon source
L-Lysine (C)
+0.0
+0.1
-0.2
-2.4
-3.7
carbon source
L-Lysine (C)
-0.3
-0.2
+0.0
-2.0
-3.4
carbon source
L-Lysine (C)
-0.0
-0.1
-0.2
-0.6
-1.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.7
-0.5
-0.1
+0.1
-0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
-0.3
-0.4
+0.1
-1.1
stress
Thallium(I) acetate 0.0025 mg/ml
-0.2
-0.5
-0.8
+0.0
-0.1
stress
Sisomicin 0.004 mg/ml
-0.0
-1.0
-0.2
+0.0
-0.4
nitrogen source
Cytosine (N)
-1.0
+0.4
-0.9
+0.2
-0.3
stress
Chlorite 0.1 mM
-0.4
-0.3
-0.4
-0.0
-0.2
stress
Aluminum chloride
-0.3
-0.6
+0.3
-0.1
-0.5
carbon source
L-Histidine (C)
+0.4
+0.3
-0.1
-0.5
-0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-1.1
-0.1
-0.0
+0.4
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.5
+0.0
-0.5
-0.2
+0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.5
-0.4
-0.1
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.5
+0.3
-0.6
-0.4
+0.6
stress
Paraquat dichloride 0.3 mg/ml
+0.3
-0.5
-0.4
+0.1
-0.3
nitrogen source
NAG (N)
-0.4
+0.4
-0.5
-0.2
+0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.0
+0.5
-0.1
+0.1
-0.9
nitrogen source
L-Leucine (N)
+0.3
+0.0
-0.5
-0.4
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
+0.2
-0.9
+0.5
+0.2
pH
LB, pH6
+0.3
-0.6
-0.1
+0.1
+0.4
nitrogen source
L-Histidine (N)
-0.6
+0.6
-0.5
+0.2
+0.6
nitrogen source
L-Arginine (N)
-0.6
+0.5
+0.1
+0.4
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.6
+0.3
+0.2
+0.3
+0.5
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.4
+0.1
+0.4
+0.2
+0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.3
+0.3
+0.1
+0.5
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
+0.3
-0.4
+0.3
+1.1
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