Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20174 and SM_b20175 overlap by 44 nucleotidesSM_b20175 and SM_b20176 overlap by 4 nucleotidesSM_b20176 and SM_b20177 are separated by 173 nucleotidesSM_b20177 and SM_b20178 are separated by 126 nucleotides SM_b20174: SM_b20174 - cytochrome c protein, at 192,858 to 193,388 _b20174 SM_b20175: SM_b20175 - hypothetical protein, at 193,345 to 194,211 _b20175 SM_b20176: SM_b20176 - hypothetical protein, at 194,208 to 194,753 _b20176 SM_b20177: SM_b20177 - hypothetical protein, at 194,927 to 195,448 _b20177 SM_b20178: SM_b20178 - hypothetical protein, at 195,575 to 196,762 _b20178
Group Condition SM_b20174 SM_b20175 SM_b20176 SM_b20177 SM_b20178
carbon source L-Lysine (C) -0.3 -0.1 -0.5 -0.1 -0.4
carbon source 5-Aminovaleric (C) -0.4 -0.3 +0.2 -0.5 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.2 +0.1 -0.9 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 +0.2 -0.7 +0.1 -0.3
carbon source methyl 3-keto-a-D-glucopyranoside (C) -0.3 -0.3 +0.3 -0.4 -0.1
nitrogen source L-Glutamine (N) -0.1 -0.3 +0.3 -0.1 -0.5
nitrogen source L-Arginine (N) -0.0 +0.2 -0.8 -0.6 +0.5
carbon source D-Cellobiose (C) -0.1 -0.2 +0.3 -0.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -0.3 +0.1 +0.4 -0.1
stress Nickel (II) chloride 1 mM -0.2 -0.0 +0.5 -0.2 -0.4
carbon source Methyl beta-D-glucopyranoside (C) -0.4 -0.3 +0.4 +0.2 -0.1
carbon source Xylobiose (C) -0.2 -0.2 +0.2 +0.2 -0.3
nitrogen source NAG (N) -0.1 -0.1 +0.4 -0.3 -0.2
nitrogen source D-Glucosamine Hydrochloride (N) +0.2 +0.0 -0.3 -0.4 +0.3
stress Chlorite 0.1 mM -0.4 -0.1 -0.1 +0.2 +0.3
stress Polymyxin B sulfate 0.00005 mg/ml -0.0 +0.3 -0.1 +0.3 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 -0.1 -0.5 +0.6 -0.1
r2a control R2A control for volatile experiments +0.2 -0.2 +0.4 -0.1 -0.2
nitrogen source L-Asparagine (N) -0.1 +0.1 +0.5 -0.3 -0.1
r2a control R2A control for volatile experiments +0.1 -0.1 +0.3 -0.3 +0.2
stress Cisplatin 0.001 mg/ml +0.2 +0.3 +0.4 -0.0 -0.3
nutrient L-Histidine +0.2 +0.1 +0.2 +0.4 -0.3
stress nitrate 40 mM +0.2 +0.3 +0.2 +0.4 -0.4
lb LB +0.3 -0.1 -0.1 +0.7 +0.0
lb LB -0.2 +0.0 +0.4 +0.3 +0.2
nutrient L-Lysine +0.0 +0.1 +0.4 +0.5 -0.1
stress copper (II) chloride 1 mM +0.2 -0.0 +0.7 +0.2 -0.1
stress perchlorate 10 mM +0.2 -0.3 +0.2 +0.2 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.3 +0.7 -0.2 +0.0
temperature LB, 30C +0.1 +0.1 +0.3 +0.3 +0.2
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