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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b20167 and SM_b20168 are separated by 134 nucleotides
SM_b20168 and SM_b20169 are separated by 128 nucleotides
SM_b20169 and SM_b20170 are separated by 169 nucleotides
SM_b20170 and SM_b20171 overlap by 4 nucleotides
SM_b20167: SM_b20167 - hypothetical protein, at 185,422 to 186,234
_b20167
SM_b20168: SM_b20168 - hypothetical protein, at 186,369 to 187,466
_b20168
SM_b20169: SM_b20169 - hypothetical protein, at 187,595 to 188,236
_b20169
SM_b20170: SM_b20170 - glutathione-dependent formaldehyde dehydrogenase, at 188,406 to 189,533
_b20170
SM_b20171: SM_b20171 - carboxylesterase, at 189,530 to 190,372
_b20171
Group
Condition
SM
_b20167
SM
_b20168
SM
_b20169
SM
_b20170
SM
_b20171
carbon source
5-Aminovaleric (C)
-0.2
-0.4
-0.4
N.D.
-0.0
stress
1-octen-3-ol 0.4933903333 mM
-0.3
-0.4
-0.3
N.D.
-0.0
r2a control
R2A control for volatile experiments
-0.3
-0.3
-0.3
N.D.
-0.0
carbon source
D-Mannitol (C)
-0.4
-0.3
+0.1
N.D.
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.3
-0.2
-0.3
N.D.
+0.0
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.2
-0.3
-0.3
N.D.
+0.1
stress
Sisomicin 0.004 mg/ml
+0.1
-0.4
-0.1
N.D.
-0.3
carbon source
5-Aminovaleric (C)
-0.3
-0.1
-0.5
N.D.
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.8
+0.0
N.D.
+0.1
stress
Thallium(I) acetate 0.0025 mg/ml
+0.0
-0.5
+0.1
N.D.
-0.2
nitrogen source
Gelatin (N)
+0.2
+0.0
-0.4
N.D.
-0.3
carbon source
palatinose (C)
-0.3
-0.2
+0.1
N.D.
-0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
-0.0
-0.5
N.D.
+0.2
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.4
-0.2
-0.1
N.D.
+0.2
stress
3-octanone 5.310333333 mM
-0.3
+0.0
-0.3
N.D.
+0.2
lb no stress control
LB no stress control
-0.3
+0.1
-0.3
N.D.
+0.1
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.3
-0.1
-0.2
N.D.
+0.2
stress
Paraquat dichloride 0.2 mg/ml
+0.2
-0.4
-0.2
N.D.
+0.1
nitrogen source
Cytosine (N)
-0.1
+0.4
-0.4
N.D.
-0.1
nitrogen source
L-Leucine (N)
+0.3
+0.2
-0.2
N.D.
-0.5
stress
Aluminum chloride
+0.3
-0.6
-0.1
N.D.
+0.2
stress
Cisplatin 0.001 mg/ml
+0.4
-0.6
+0.1
N.D.
-0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.5
-0.1
+0.9
N.D.
-0.4
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.3
-0.2
-0.2
N.D.
+0.3
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.3
-0.1
-0.3
N.D.
+0.2
nitrogen source
L-Serine (N)
+0.3
+0.3
-0.1
N.D.
-0.2
nitrogen source
L-Asparagine (N)
+0.2
+0.6
-0.2
N.D.
-0.2
carbon source
D-Ribose (C)
+0.2
+0.4
-0.2
N.D.
+0.1
carbon source
L-Fucose (C)
+0.2
+0.1
+0.2
N.D.
+0.3
carbon source
D-Raffinose (C)
+0.3
+0.3
+0.1
N.D.
+0.2
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