Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b22005 and SM_b20161 overlap by 4 nucleotidesSM_b20161 and SM_b20162 are separated by 193 nucleotidesSM_b20162 and SM_b20163 are separated by 44 nucleotidesSM_b20163 and SM_b20164 overlap by 4 nucleotides SM_b22005: SM_b22005 - hypothetical protein, at 179,168 to 179,536 _b22005 SM_b20161: SM_b20161 - hypothetical protein, at 179,533 to 179,883 _b20161 SM_b20162: SM_b20162 - transcriptional regulator, at 180,077 to 180,766 _b20162 SM_b20163: SM_b20163 - hypothetical protein, at 180,811 to 181,980 _b20163 SM_b20164: SM_b20164 - sensor histidine kinase, at 181,977 to 184,220 _b20164
Group Condition SM_b22005 SM_b20161 SM_b20162 SM_b20163 SM_b20164
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.9 -0.4 +0.3 +0.2 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -0.4 -0.3 +0.0 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -0.2 -0.3 -0.5 -0.1
r2a control R2A control for volatile experiments -0.8 -0.1 -0.2 -0.4 -0.1
r2a control R2A control for volatile experiments -0.7 -0.3 -0.0 -0.7 +0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -1.2 -0.2 +0.0 +0.0 -0.1
stress 3-octanone 5.310333333 mM -1.0 +0.0 -0.3 -0.1 +0.0
nitrogen source L-Glutamine (N) -0.5 -0.1 +0.3 -0.6 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 +0.2 -0.1 +0.1 +0.2
carbon source Uridine (C) -0.6 -0.4 +0.2 +0.2 -0.1
lb LB -1.4 +0.2 +0.3 +0.3 +0.2
carbon source 5-Aminovaleric (C) +0.5 +0.2 -0.2 -0.3 -0.4
stress 3-octanone 0.456 mM +0.4 +0.5 -0.4 -0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.2 -0.4 -0.1 -0.2
stress 1-octen-3-ol 0.5427293333 mM +0.8 -0.3 -0.3 +0.2 -0.1
stress D-Cycloserine 0.05 mg/ml -0.6 +0.4 -0.0 +0.1 +0.6
stress Paraquat dichloride 0.2 mg/ml -0.7 -0.1 +0.6 +0.4 +0.2
carbon source D-Glucose (C) +0.9 -0.4 -0.1 +0.2 -0.1
stress Paraquat dichloride 0.05 mg/ml -0.4 +0.3 +0.2 +0.3 +0.3
nitrogen source Cytosine (N) -0.4 +0.7 +0.2 +0.1 +0.3
carbon source Lactitol (C) -0.3 +0.5 +0.3 -0.0 +0.4
stress Chlorite 0.1 mM +0.9 +0.2 +0.1 +0.2 -0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.2 +0.4 +0.3 +0.5 +0.3
nitrogen source D-Glucosamine Hydrochloride (N) +0.9 +0.6 +0.2 +0.1 -0.3
nitrogen source L-Asparagine (N) +0.9 +0.5 -0.1 -0.2 +0.3
nitrogen source NAG (N) +1.2 +0.3 +0.2 -0.2 +0.1
nitrogen source Gelatin (N) +0.8 +0.3 +0.1 +0.2 +0.3
nitrogen source L-Arginine (N) +1.0 +0.9 -0.3 -0.0 +0.3
stress Sisomicin 0.004 mg/ml +0.6 +0.2 +0.6 +0.3 +0.2
nitrogen source Gly-DL-Asp (N) +1.0 +0.4 +0.2 +0.3 +0.1
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