Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20144 and SM_b20145 are separated by 314 nucleotidesSM_b20145 and SM_b20146 overlap by 1 nucleotidesSM_b20146 and SM_b20147 overlap by 4 nucleotidesSM_b20147 and SM_b20148 are separated by 224 nucleotides SM_b20144: SM_b20144 - ABC transporter oligopeptide-binding protein, at 158,386 to 159,891 _b20144 SM_b20145: SM_b20145 - hypothetical protein, at 160,206 to 161,393 _b20145 SM_b20146: SM_b20146 - pyridoxal phosphate biosynthetic protein, at 161,393 to 162,358 _b20146 SM_b20147: SM_b20147 - alcohol dehydrogenase, at 162,355 to 163,461 _b20147 SM_b20148: SM_b20148 - transcriptional regulator, at 163,686 to 164,387 _b20148
Group Condition SM_b20144 SM_b20145 SM_b20146 SM_b20147 SM_b20148
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 -1.2 -1.6 -0.0 -0.2
carbon source Lactitol (C) -0.2 +0.1 -0.4 -0.0 -1.8
r2a-hepes control R2A-HEPES control for volatile experiments -0.3 -0.2 -0.3 -0.3 -1.0
stress Sisomicin 0.004 mg/ml -0.1 -0.2 -1.4 -0.2 -0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.0 -0.2 -0.6 -0.2 -0.9
carbon source Lactitol (C) -0.4 -0.1 -0.1 +0.1 -1.4
carbon source L-Histidine (C) -0.0 +0.1 +0.3 +0.0 -2.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.0 +0.3 -0.6 -0.5 -0.8
carbon source L-Lysine (C) -0.0 +0.3 +0.1 -0.2 -1.4
carbon source pipercolic (C) +0.0 +0.2 -0.0 +0.3 -1.5
nutrient L-Lysine -0.3 +0.2 +0.5 +0.1 -1.2
nutrient L-Histidine -0.2 +0.1 +0.6 -0.2 -0.9
stress Cisplatin 0.001 mg/ml +0.0 +0.4 +0.4 -0.3 -1.0
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 +0.6 +0.3 -0.4 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.8 +0.0 -0.7 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.6 -0.7 +0.2 +0.0
nitrogen source L-Asparagine (N) +0.4 +0.8 +0.3 +0.3 -1.1
stress Paraquat dichloride 0.2 mg/ml +0.0 +1.0 +1.0 -0.2 -0.7
stress Polymyxin B sulfate 0.00005 mg/ml +0.2 +0.6 +0.9 -0.3 -0.4
stress nitrate 40 mM +0.1 +0.6 +0.9 +0.3 -0.6
stress Paraquat dichloride 0.3 mg/ml -0.1 +0.9 +1.0 +0.0 -0.0
stress Paraquat dichloride 0.2 mg/ml +0.4 +0.6 +1.4 +0.1 -0.4
lb LB +0.1 +0.8 +1.6 +0.1 -0.1
stress Nickel (II) chloride 1 mM +0.3 +0.0 +1.8 -0.2 +0.7
lb LB +0.0 +0.7 +1.7 +0.4 -0.2
stress Chlorite 0.1 mM +0.2 +1.3 +0.7 +0.7 +0.1
stress Paraquat dichloride 0.05 mg/ml +0.4 +0.7 +2.0 +0.0 -0.0
lb LB +0.4 +1.0 +2.6 +0.2 -0.3
stress D-Cycloserine 0.05 mg/ml +0.4 +1.0 +2.6 -0.1 -0.0
stress perchlorate 10 mM +0.4 +1.2 +2.8 +0.2 -0.1
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