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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b20126 and SM_b20127 are separated by 152 nucleotides
SM_b20127 and SM_b20128 are separated by 55 nucleotides
SM_b20128 and SM_b20129 are separated by 449 nucleotides
SM_b20129 and SM_b20130 are separated by 50 nucleotides
SM_b20126: SM_b20126 - sugar ABC transporter permease, at 137,756 to 138,853
_b20126
SM_b20127: SM_b20127 - hypothetical protein, at 139,006 to 139,986
_b20127
SM_b20128: SM_b20128 - deaminase, at 140,042 to 141,355
_b20128
SM_b20129: SM_b20129 - transcriptional regulator, at 141,805 to 142,584
_b20129
SM_b20130: SM_b20130 - dehydrogenase, at 142,635 to 143,498
_b20130
Group
Condition
SM
_b20126
SM
_b20127
SM
_b20128
SM
_b20129
SM
_b20130
carbon source
L-Alanine (C)
-0.2
-0.1
-0.4
-0.3
-0.2
r2a control
R2A control for volatile experiments
-0.1
-0.0
-0.4
-0.2
-0.6
stress
1-octen-3-ol 0.4933903333 mM
+0.1
-0.0
-0.5
-0.4
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
+0.1
-0.5
+0.1
-0.5
stress
3-octanone 5.310333333 mM
-0.1
+0.1
-0.6
-0.4
+0.1
r2a control
R2A control
-0.1
+0.2
-0.6
+0.0
-0.3
stress
Aluminum chloride
+0.2
+0.1
-0.2
-0.5
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.2
+0.7
-0.6
-0.3
carbon source
D-Ribose (C)
-0.0
+0.0
+0.4
-0.4
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-0.4
-0.5
+0.3
+0.2
nitrogen source
L-Serine (N)
+0.1
+0.2
+0.5
-0.9
-0.1
nitrogen source
Gly-DL-Asp (N)
-0.0
+0.1
+0.5
-0.4
-0.4
stress
Cisplatin 0.001 mg/ml
+0.2
-0.4
+0.1
-0.6
+0.4
carbon source
Methyl beta-D-glucopyranoside (C)
+0.1
+0.2
+0.2
-0.2
-0.6
nitrogen source
NAG (N)
+0.1
-0.0
-0.6
-0.1
+0.3
nitrogen source
nitrate (N)
+0.3
-0.1
-0.2
-0.4
+0.2
stress
Paraquat dichloride 0.2 mg/ml
-0.2
+0.1
+0.5
-0.3
-0.2
stress
1-octen-3-ol 0.5427293333 mM
+0.1
+0.1
-0.4
+0.4
-0.2
carbon source
succinate (C)
+0.3
-0.1
+0.3
+0.0
-0.5
stress
Nickel (II) chloride 1 mM
+0.4
+0.2
+0.4
-0.8
-0.2
carbon source
D-Glucose (C)
+0.1
-0.2
+0.4
+0.3
-0.4
nutrient
L-Histidine
-0.1
+0.3
+0.5
-0.3
-0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.0
+0.0
-0.5
+0.6
+0.1
carbon source
Beta-Lactose (C)
+0.1
+0.1
-0.4
+0.3
+0.3
lb
LB
-0.0
-0.0
+0.5
+0.4
-0.3
stress
Paraquat dichloride 0.3 mg/ml
+0.2
+0.0
+0.5
-0.4
+0.1
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.2
+0.3
-0.6
+0.5
+0.2
nitrogen source
L-Asparagine (N)
+0.2
+0.2
+0.5
+0.4
-0.4
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.5
+0.0
+0.7
-0.3
-0.0
nitrogen source
L-Arginine (N)
+0.5
+0.3
+0.2
-0.2
+0.4
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