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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b20089 and SM_b20090 are separated by 3 nucleotides
SM_b20090 and SM_b20091 are separated by 115 nucleotides
SM_b20091 and SM_b20092 are separated by 85 nucleotides
SM_b20092 and SM_b20093 are separated by 37 nucleotides
SM_b20089: SM_b20089 - hypothetical protein, at 98,552 to 98,875
_b20089
SM_b20090: SM_b20090 - hypothetical protein, at 98,879 to 99,070
_b20090
SM_b20091: SM_b20091 - hypothetical protein, at 99,186 to 99,692
_b20091
SM_b20092: SM_b20092 - hypothetical protein, at 99,778 to 100,536
_b20092
SM_b20093: SM_b20093 - hypothetical protein, at 100,574 to 101,515
_b20093
Group
Condition
SM
_b20089
SM
_b20090
SM
_b20091
SM
_b20092
SM
_b20093
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
N.D.
-0.5
-0.8
-0.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.9
N.D.
-0.1
+0.7
-0.7
nitrogen source
L-Histidine (N)
-1.1
N.D.
-0.7
-0.0
-0.1
nitrogen source
L-Asparagine (N)
-0.5
N.D.
+0.4
-0.9
-0.8
carbon source
D-Mannose (C)
-0.9
N.D.
-0.4
-0.3
-0.2
stress
Chlorite 0.1 mM
-1.3
N.D.
-0.3
-0.2
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.1
N.D.
-0.2
-0.3
+0.2
carbon source
Methyl beta-D-glucopyranoside (C)
-0.8
N.D.
-0.2
-0.1
-0.2
stress
Thallium(I) acetate 0.0025 mg/ml
-0.6
N.D.
-0.7
-0.1
+0.1
carbon source
D-Mannitol (C)
-1.0
N.D.
-0.2
-0.1
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.2
N.D.
-0.1
+0.1
+0.0
carbon source
methyl-beta-D-xylopyranoside (C)
-1.0
N.D.
+0.1
-0.1
-0.2
stress
nitrate 40 mM
-0.9
N.D.
-0.2
-0.2
+0.1
carbon source
Fumarate (C)
-0.8
N.D.
-0.4
+0.2
-0.0
carbon source
D-Glucose (C)
-0.4
N.D.
-0.1
-0.6
+0.2
stress
Paraquat dichloride 0.2 mg/ml
-0.5
N.D.
-0.7
+0.3
-0.1
stress
Aluminum chloride
-0.1
N.D.
-0.4
-0.6
+0.3
r2a control
R2A control
+0.4
N.D.
-0.3
-0.4
-0.4
nitrogen source
nitrate (N)
-0.7
N.D.
+0.1
-0.2
+0.4
nitrogen source
L-Leucine (N)
+0.0
N.D.
+0.2
-1.0
+0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
N.D.
+0.3
-0.4
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+0.5
N.D.
+0.0
-0.7
+0.3
carbon source
L-Malic (C)
+0.6
N.D.
+0.1
-0.3
-0.3
stress
Nickel (II) chloride 1 mM
+0.6
N.D.
-0.3
+0.3
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.7
N.D.
-1.1
+0.5
+0.2
carbon source
Beta-Lactose (C)
+0.2
N.D.
+0.3
-0.5
+0.3
pH
LB, pH6
+0.7
N.D.
-0.1
-0.3
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.0
N.D.
-0.6
+0.4
+0.3
nitrogen source
L-Arginine (N)
+0.4
N.D.
-0.1
+0.3
+0.5
carbon source
D,L-Lactate (C)
+0.5
N.D.
+0.5
+0.1
+0.3
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