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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b20068 and SM_b20069 are separated by 533 nucleotides
SM_b20069 and SM_b20070 are separated by 260 nucleotides
SM_b20070 and SM_b20071 are separated by 217 nucleotides
SM_b20071 and SM_b20072 are separated by 471 nucleotides
SM_b20068: SM_b20068 - hypothetical protein, at 75,462 to 75,671
_b20068
SM_b20069: SM_b20069 - amino acid carrier protein, at 76,205 to 77,608
_b20069
SM_b20070: SM_b20070 - sulfate permease, at 77,869 to 79,356
_b20070
SM_b20071: SM_b20071 - efflux protein, at 79,574 to 80,767
_b20071
SM_b20072: SM_b20072 - rhizopine binding protein, at 81,239 to 82,168
_b20072
Group
Condition
SM
_b20068
SM
_b20069
SM
_b20070
SM
_b20071
SM
_b20072
carbon source
L-Alanine (C)
N.D.
-0.7
-0.0
-0.2
-0.4
nutrient
L-Lysine
N.D.
-0.7
+0.3
-0.3
-0.5
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
N.D.
-0.1
-0.3
-0.0
-0.7
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
N.D.
+0.2
-0.5
-0.2
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.2
-0.3
+0.2
-1.1
stress
D-Cycloserine 0.05 mg/ml
N.D.
-1.1
-0.1
+0.2
+0.0
stress
Cisplatin 0.0005 mg/ml
N.D.
+0.1
-0.4
-0.2
-0.4
r2a control
R2A control for volatile experiments
N.D.
-0.7
-0.2
+0.2
-0.2
stress
Polymyxin B sulfate 0.00005 mg/ml
N.D.
+0.0
-0.3
-0.2
-0.5
carbon source
pipercolic (C)
N.D.
-0.0
-0.3
+0.1
-0.6
lb
LB
N.D.
-0.2
+0.2
-0.1
-0.6
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
-0.5
-0.2
+0.2
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
N.D.
+0.4
-0.4
+0.1
-0.8
r2a-hepes control
R2A-HEPES control for volatile experiments
N.D.
-0.4
+0.1
+0.2
-0.3
carbon source
L-Proline (C)
N.D.
-0.6
-0.2
+0.0
+0.3
stress
Chlorite 0.1 mM
N.D.
+0.0
+0.3
-0.1
-0.8
nitrogen source
L-Leucine (N)
N.D.
-0.2
-0.6
+0.2
+0.1
carbon source
D-Trehalose (C)
N.D.
-0.2
-0.1
+0.3
-0.5
stress
3-octanone 5.310333333 mM
N.D.
+0.1
-0.4
+0.2
-0.3
stress
Thallium(I) acetate 0.0025 mg/ml
N.D.
-0.3
+0.2
-0.3
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.5
-0.3
+0.2
+0.4
r2a control
R2A control for volatile experiments
N.D.
-0.4
+0.3
-0.1
+0.2
carbon source
L-Lysine (C)
N.D.
+0.4
-0.1
+0.1
-0.4
carbon source
D-Leucrose (C)
N.D.
+0.2
+0.1
+0.1
-0.4
carbon source
D-Xylose (C)
N.D.
+0.3
+0.2
+0.1
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.4
+0.1
+0.3
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.6
-0.1
+0.2
-0.4
stress
1-octen-3-ol 0.5427293333 mM
N.D.
+0.4
-0.2
+0.1
+0.3
nitrogen source
L-Asparagine (N)
N.D.
+0.5
+0.0
-0.1
+0.4
nitrogen source
Uridine (N)
N.D.
+0.3
+0.3
-0.2
+0.6
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