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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SM_b20063 and SM_b20064 overlap by 79 nucleotides
SM_b20064 and SM_b20065 are separated by 551 nucleotides
SM_b20065 and SM_b20066 are separated by 166 nucleotides
SM_b20066 and SM_b20067 are separated by 3 nucleotides
SM_b20063: SM_b20063 - hypothetical protein, at 72,756 to 73,052
_b20063
SM_b20064: SM_b20064 - hypothetical protein, at 72,974 to 73,420
_b20064
SM_b20065: SM_b20065 - hypothetical protein, at 73,972 to 74,370
_b20065
SM_b20066: SM_b20066 - hypothetical protein, at 74,537 to 74,722
_b20066
SM_b20067: SM_b20067 - hypothetical protein, at 74,726 to 75,247
_b20067
Group
Condition
SM
_b20063
SM
_b20064
SM
_b20065
SM
_b20066
SM
_b20067
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
-0.2
N.D.
N.D.
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
-0.3
N.D.
N.D.
-0.3
stress
Cisplatin 0.001 mg/ml
-0.7
-0.1
N.D.
N.D.
-0.3
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
-0.4
N.D.
N.D.
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
-0.4
N.D.
N.D.
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.5
-0.1
N.D.
N.D.
-0.2
stress
Thallium(I) acetate 0.0025 mg/ml
-0.2
-0.4
N.D.
N.D.
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
+0.1
N.D.
N.D.
-0.6
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.2
-0.2
N.D.
N.D.
-0.3
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.4
-0.0
N.D.
N.D.
-0.3
stress
1-octen-3-ol 0.4933903333 mM
-0.2
-0.3
N.D.
N.D.
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.1
N.D.
N.D.
-0.6
lb no stress control
LB no stress control
-0.3
-0.2
N.D.
N.D.
-0.1
nitrogen source
L-Leucine (N)
-0.3
-0.4
N.D.
N.D.
+0.1
stress
3-octanone 2.655166667 mM
-0.4
-0.2
N.D.
N.D.
-0.0
stress
Cisplatin 0.0005 mg/ml
-0.4
+0.1
N.D.
N.D.
-0.3
stress
Paraquat dichloride 0.2 mg/ml
+0.3
-0.1
N.D.
N.D.
-0.4
carbon source
methyl-beta-D-xylopyranoside (C)
+0.1
+0.1
N.D.
N.D.
-0.5
nitrogen source
L-Histidine (N)
-0.3
-0.2
N.D.
N.D.
+0.2
carbon source
D-Mannose (C)
-0.1
+0.2
N.D.
N.D.
-0.4
carbon source
pyruvate (C)
-0.3
+0.3
N.D.
N.D.
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.5
+0.2
N.D.
N.D.
+0.2
carbon source
Methyl beta-D-glucopyranoside (C)
+0.2
+0.3
N.D.
N.D.
-0.4
nitrogen source
nitrate (N)
+0.2
-0.2
N.D.
N.D.
+0.2
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
+0.2
+0.3
N.D.
N.D.
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.2
N.D.
N.D.
+0.5
carbon source
D-Ribose (C)
+0.4
+0.2
N.D.
N.D.
-0.2
carbon source
D-Ribose (C)
+0.3
+0.3
N.D.
N.D.
-0.1
carbon source
Protocatechuic Acid (C)
+0.2
+0.2
N.D.
N.D.
+0.3
carbon source
5-Aminovaleric (C)
+0.4
+0.3
N.D.
N.D.
+0.2
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