Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20057 and SM_b20058 overlap by 4 nucleotidesSM_b20058 and SM_b20059 are separated by 3 nucleotidesSM_b20059 and SM_b20060 are separated by 91 nucleotidesSM_b20060 and SM_b22003 are separated by 158 nucleotides SM_b20057: SM_b20057 - ABC transporter permease, at 67,708 to 68,751 _b20057 SM_b20058: SM_b20058 - ABC transporter ATP-binding protein, at 68,748 to 69,548 _b20058 SM_b20059: SM_b20059 - SAM-dependent methyltransferase, at 69,552 to 70,331 _b20059 SM_b20060: SM_b20060 - ISRm5 transposase, at 70,423 to 71,619 _b20060 SM_b22003: SM_b22003 - hypothetical protein, at 71,778 to 72,098 _b22003
Group Condition SM_b20057 SM_b20058 SM_b20059 SM_b20060 SM_b22003
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) N.D. N.D. -0.8 N.D. -0.3
stress Cisplatin 0.0005 mg/ml N.D. N.D. -0.4 N.D. -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.5 N.D. -0.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) N.D. N.D. -0.2 N.D. -0.7
lb no stress control LB no stress control N.D. N.D. -0.6 N.D. -0.2
lb no stress control LB no stress control N.D. N.D. -0.4 N.D. -0.3
carbon source D-Glucose (C) N.D. N.D. -0.7 N.D. -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.0 N.D. -0.6
dmso control DMSO control N.D. N.D. -0.4 N.D. -0.2
dmso control DMSO control N.D. N.D. -0.2 N.D. -0.4
stress perchlorate 10 mM N.D. N.D. -0.1 N.D. -0.5
stress 3-octanone 2.655166667 mM N.D. N.D. -0.2 N.D. -0.4
stress 3-octanone 0.456 mM N.D. N.D. -0.3 N.D. -0.2
carbon source Protocatechuic Acid (C) N.D. N.D. -0.4 N.D. -0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI N.D. N.D. -0.6 N.D. +0.0
carbon source L-Arabinose (C) N.D. N.D. -0.5 N.D. +0.1
carbon source 5-Aminovaleric (C) N.D. N.D. -0.5 N.D. +0.1
carbon source D-Mannose (C) N.D. N.D. -0.5 N.D. +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.5 N.D. +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.4 N.D. +0.2
stress Chlorite 0.1 mM N.D. N.D. +0.2 N.D. -0.4
nitrogen source D-Glucosamine Hydrochloride (N) N.D. N.D. -0.4 N.D. +0.3
carbon source Protocatechuic Acid (C) N.D. N.D. -0.3 N.D. +0.2
carbon source D-Xylose (C) N.D. N.D. -0.4 N.D. +0.3
carbon source D-Mannitol (C) N.D. N.D. -0.2 N.D. +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. +0.4 N.D. -0.1
stress Paraquat dichloride 0.3 mg/ml N.D. N.D. -0.2 N.D. +0.4
nitrogen source L-Histidine (N) N.D. N.D. +0.2 N.D. +0.4
stress Polymyxin B sulfate 0.00005 mg/ml N.D. N.D. +0.4 N.D. +0.1
stress Thallium(I) acetate 0.0025 mg/ml N.D. N.D. +0.3 N.D. +0.4
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