Fitness for 5 genes in Sinorhizobium meliloti 1021

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 243 experiments or choose conditions or try the comparative fitness browser

500 ntSM_b20055 and SM_b20056 are separated by 1659 nucleotidesSM_b20056 and SM_b20057 overlap by 4 nucleotidesSM_b20057 and SM_b20058 overlap by 4 nucleotidesSM_b20058 and SM_b20059 are separated by 3 nucleotides SM_b20055: SM_b20055 - transcriptional regulator, at 63,995 to 64,984 _b20055 SM_b20056: SM_b20056 - ABC transporter substrate-binding protein, at 66,644 to 67,711 _b20056 SM_b20057: SM_b20057 - ABC transporter permease, at 67,708 to 68,751 _b20057 SM_b20058: SM_b20058 - ABC transporter ATP-binding protein, at 68,748 to 69,548 _b20058 SM_b20059: SM_b20059 - SAM-dependent methyltransferase, at 69,552 to 70,331 _b20059
Group Condition SM_b20055 SM_b20056 SM_b20057 SM_b20058 SM_b20059
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 N.D. N.D. N.D. -0.5
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -1.1 N.D. N.D. N.D. -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 N.D. N.D. N.D. -0.2
stress perchlorate 10 mM -1.4 N.D. N.D. N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 N.D. N.D. N.D. -0.4
carbon source D-Mannose (C) -0.8 N.D. N.D. N.D. -0.5
stress 3-octanone 0.456 mM -1.0 N.D. N.D. N.D. -0.3
stress D-Cycloserine 0.05 mg/ml -1.3 N.D. N.D. N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 N.D. N.D. N.D. +0.2
carbon source Sucrose (C) -1.1 N.D. N.D. N.D. -0.0
carbon source Lactitol (C) -0.8 N.D. N.D. N.D. -0.3
stress Thallium(I) acetate 0.0025 mg/ml -1.4 N.D. N.D. N.D. +0.3
r2a-hepes control R2A-HEPES control for volatile experiments -0.8 N.D. N.D. N.D. -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 N.D. N.D. N.D. +0.4
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.8 N.D. N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 N.D. N.D. N.D. +0.2
carbon source D-Glucose (C) +0.4 N.D. N.D. N.D. -0.7
stress Cisplatin 0.0005 mg/ml +0.7 N.D. N.D. N.D. -0.4
carbon source L-Arabinose (C) +0.7 N.D. N.D. N.D. -0.4
carbon source Fumarate (C) +0.7 N.D. N.D. N.D. -0.4
carbon source 5-Aminovaleric (C) +0.9 N.D. N.D. N.D. -0.5
carbon source D-Xylose (C) +0.8 N.D. N.D. N.D. -0.4
carbon source D-Glucose (C) +0.9 N.D. N.D. N.D. -0.2
carbon source succinate (C) +1.0 N.D. N.D. N.D. -0.3
stress Chlorite 0.1 mM +0.9 N.D. N.D. N.D. +0.2
nitrogen source L-Serine (N) +0.9 N.D. N.D. N.D. +0.3
carbon source Myristic (C) +1.2 N.D. N.D. N.D. +0.0
nitrogen source L-Glutamine (N) +1.3 N.D. N.D. N.D. +0.2
nitrogen source NAG (N) +1.6 N.D. N.D. N.D. -0.1
nitrogen source L-Histidine (N) +1.3 N.D. N.D. N.D. +0.2
remove
SM_b20055
plot		 remove
SM_b20056
plot		 remove
SM_b20057		 remove
SM_b20058
plot		 remove
SM_b20059
plot