Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20046 and SM_b20047 are separated by 366 nucleotidesSM_b20047 and SM_b20048 are separated by 168 nucleotidesSM_b20048 and SM_b20049 are separated by 118 nucleotidesSM_b20049 and SM_b20050 are separated by 143 nucleotides SM_b20046: SM_b20046 - replication protein A, at 57,564 to 58,760 _b20046 SM_b20047: SM_b20047 - hypothetical protein, at 59,127 to 59,315 _b20047 SM_b20048: SM_b20048 - transcriptional regulator, at 59,484 to 60,191 _b20048 SM_b20049: SM_b20049 - elongation factor G, at 60,310 to 62,271 _b20049 SM_b20050: SM_b20050 - hypothetical protein, at 62,415 to 62,924 _b20050
Group Condition SM_b20046 SM_b20047 SM_b20048 SM_b20049 SM_b20050
carbon source L-Histidine (C) N.D. N.D. -6.1 +0.2 -0.1
nitrogen source L-Histidine (N) N.D. N.D. -2.5 +0.3 +0.0
nutrient L-Histidine N.D. N.D. -1.9 -0.2 -0.1
nutrient L-Histidine N.D. N.D. -2.0 -0.1 -0.1
stress Nickel (II) chloride 1 mM N.D. N.D. -1.9 -0.0 +0.3
nitrogen source L-Leucine (N) N.D. N.D. -0.2 +0.1 -1.1
r2a control R2A control for volatile experiments N.D. N.D. -0.0 +0.0 -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -0.6 +0.1 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.2 -0.6 -0.2
carbon source Myristic (C) N.D. N.D. -0.7 +0.1 -0.3
stress Polymyxin B sulfate 0.00005 mg/ml N.D. N.D. -0.2 +0.1 -0.7
pH LB, pH7 N.D. N.D. -0.2 +0.2 -0.8
nutrient L-Lysine N.D. N.D. -0.5 -0.1 +0.4
stress Paraquat dichloride 0.3 mg/ml N.D. N.D. -0.3 -0.5 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. N.D. -0.5 -0.3 +0.6
carbon source L-Alanine (C) N.D. N.D. -0.5 -0.1 +0.5
nitrogen source Gly-DL-Asp (N) N.D. N.D. +0.5 +0.2 -0.7
carbon source L-Glutamine (C) N.D. N.D. -0.4 +0.0 +0.6
carbon source L-Alanine (C) N.D. N.D. -0.4 +0.0 +0.6
nitrogen source D-Glucosamine Hydrochloride (N) N.D. N.D. -0.6 -0.1 +1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.1 -0.3 +0.7
carbon source Lactitol (C) N.D. N.D. -0.4 +0.1 +0.8
carbon source Uridine (C) N.D. N.D. -0.4 +0.2 +0.7
carbon source D-Mannose (C) N.D. N.D. -0.3 -0.2 +1.0
carbon source L-Lysine (C) N.D. N.D. -0.3 -0.3 +1.1
carbon source D-Glucosamine Hydrochloride (C) N.D. N.D. -0.1 +0.1 +0.8
carbon source D-Mannitol (C) N.D. N.D. -0.1 +0.1 +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. +0.1 -0.2 +1.1
nitrogen source Cytosine (N) N.D. N.D. +0.4 -0.2 +1.0
nitrogen source L-Asparagine (N) N.D. N.D. +0.3 -0.1 +1.0
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