Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20037 and SM_b20038 are separated by 216 nucleotidesSM_b20038 and SM_b20039 are separated by 96 nucleotidesSM_b20039 and SM_b20040 are separated by 81 nucleotidesSM_b20040 and SM_b20041 are separated by 190 nucleotides SM_b20037: SM_b20037 - shikimate 5-dehydrogenase, at 47,745 to 48,605 _b20037 SM_b20038: SM_b20038 - hypothetical protein, at 48,822 to 49,049 _b20038 SM_b20039: SM_b20039 - transcriptional regulator, at 49,146 to 50,570 _b20039 SM_b20040: SM_b20040 - hypothetical protein, at 50,652 to 51,512 _b20040 SM_b20041: SM_b20041 - hypothetical protein, at 51,703 to 52,233 _b20041
Group Condition SM_b20037 SM_b20038 SM_b20039 SM_b20040 SM_b20041
stress D-Cycloserine 0.05 mg/ml -0.3 N.D. -2.2 -1.3 +0.1
nitrogen source L-Glutamine (N) -0.5 N.D. -0.1 -0.3 -0.4
nitrogen source nitrate (N) -0.4 N.D. -0.4 -0.5 -0.0
nitrogen source L-Histidine (N) -0.5 N.D. -0.1 -0.0 -0.6
nitrogen source NAG (N) -0.2 N.D. +0.3 -0.2 -1.1
nitrogen source Gelatin (N) -0.4 N.D. +0.3 -0.7 -0.1
carbon source NAG (C) -0.6 N.D. -0.2 -0.2 +0.1
nitrogen source L-Arginine (N) -0.1 N.D. -0.2 +0.3 -0.8
carbon source Beta-Lactose (C) -0.4 N.D. -0.2 -0.3 +0.3
carbon source acetate (C) +0.1 N.D. -0.1 +0.3 -0.7
stress Polymyxin B sulfate 0.00005 mg/ml +0.1 N.D. +0.4 -0.0 -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.0 N.D. +0.0 +0.5 -0.9
carbon source D-Glucose (C) -0.4 N.D. -0.1 -0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 N.D. +0.3 -0.3 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 N.D. +0.4 -0.4 -0.0
nitrogen source L-Leucine (N) -0.3 N.D. +0.2 +0.4 -0.2
carbon source Fumarate (C) -0.2 N.D. -0.0 +0.7 -0.2
stress Sisomicin 0.004 mg/ml +0.4 N.D. -0.1 +0.5 -0.4
stress copper (II) chloride 1 mM -0.4 N.D. -0.1 +0.7 +0.1
nitrogen source L-Asparagine (N) +0.0 N.D. -0.2 +0.7 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. +0.3 +0.1 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 N.D. +0.2 +0.6 -0.3
stress 3-octanone 2.655166667 mM +0.1 N.D. -0.3 +0.5 +0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 N.D. -0.1 +0.7 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. -0.0 +0.7 +0.5
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM +0.3 N.D. -0.2 +0.5 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 N.D. +0.2 +0.7 -0.2
stress 3-octanone 0.456 mM +0.3 N.D. -0.4 +0.8 +0.2
carbon source methyl 3-keto-a-D-glucopyranoside (C) +0.1 N.D. -0.1 +0.7 +0.3
dmso control DMSO control +0.1 N.D. -0.1 +0.6 +0.3
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