Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20030 and SM_b20031 are separated by 25 nucleotidesSM_b20031 and SM_b20032 are separated by 96 nucleotidesSM_b20032 and SM_b20033 are separated by 389 nucleotidesSM_b20033 and SM_b20034 are separated by 296 nucleotides SM_b20030: SM_b20030 - RNA polymerase sigma factor SigJ, at 41,423 to 42,280 _b20030 SM_b20031: SM_b20031 - hypothetical protein, at 42,306 to 42,554 _b20031 SM_b20032: SM_b20032 - hypothetical protein, at 42,651 to 43,385 _b20032 SM_b20033: SM_b20033 - transcriptional regulator, at 43,775 to 44,437 _b20033 SM_b20034: SM_b20034 - ABC transporter, at 44,734 to 45,297 _b20034
Group Condition SM_b20030 SM_b20031 SM_b20032 SM_b20033 SM_b20034
stress Sisomicin 0.004 mg/ml -0.6 -0.8 +0.3 -0.5 -0.5
stress Cisplatin 0.0005 mg/ml -0.2 -0.9 -0.2 -0.5 -0.1
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -0.3 -0.9 -0.1 -0.2 -0.3
nitrogen source L-Histidine (N) -0.3 -1.1 -0.1 -0.3 +0.1
nitrogen source NAG (N) -0.2 -0.6 -0.3 -0.1 -0.2
nitrogen source Gelatin (N) +0.1 -0.8 +0.1 -0.4 -0.5
stress perchlorate 10 mM -0.6 -1.0 -0.2 -0.1 +0.3
nitrogen source L-Leucine (N) -0.2 -1.1 -0.3 -0.0 +0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.2 -0.6 +0.1 -0.5 -0.5
stress Thallium(I) acetate 0.0025 mg/ml +0.0 -1.5 -0.2 -0.0 +0.5
carbon source Protocatechuic Acid (C) +0.3 -0.5 -0.3 -0.4 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.3 -0.1 -0.7 +0.4
nitrogen source Cytosine (N) -0.0 -1.3 +0.0 -0.1 +0.7
stress copper (II) chloride 1 mM -0.6 -0.7 -0.2 +0.4 +0.3
stress Thallium(I) acetate 0.001 mg/ml -0.2 -0.5 +0.2 -0.5 +0.3
r2a control R2A control -0.1 -0.6 +0.3 +0.1 -0.5
stress Paraquat dichloride 0.2 mg/ml -0.0 -0.7 -0.2 +0.1 +0.4
stress Polymyxin B sulfate 0.00005 mg/ml +0.5 -0.4 +0.2 -0.7 -0.0
carbon source methyl-beta-D-xylopyranoside (C) +0.5 +0.1 -0.3 -0.1 -0.5
carbon source D-Glucose (C) +0.4 -0.5 -0.0 +0.2 -0.3
lb LB -0.4 +0.3 -0.0 -0.3 +0.5
carbon source L-Alanine (C) -0.0 +0.8 -0.2 -0.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 -0.3 -0.2 +0.2 -0.6
carbon source 5-Aminovaleric (C) +0.3 +0.4 -0.2 +0.3 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -0.1 +0.4 +0.0 +0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.5 -0.3 +0.6 +0.2
nutrient L-Lysine +0.6 +0.4 +0.1 +0.4 +0.2
nutrient L-Histidine +0.5 +0.6 -0.1 +0.2 +0.5
nutrient L-Lysine +0.4 +0.7 +0.0 +0.4 +0.2
nutrient L-Histidine +0.4 +1.1 +0.0 +0.3 +0.3
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