Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20026 and SM_b20027 are separated by 12 nucleotidesSM_b20027 and SM_b20028 are separated by 63 nucleotidesSM_b20028 and SM_b20029 are separated by 439 nucleotidesSM_b20029 and SM_b20030 overlap by 1 nucleotides SM_b20026: SM_b20026 - hypothetical protein, at 37,331 to 37,792 _b20026 SM_b20027: SM_b20027 - hypothetical protein, at 37,805 to 39,310 _b20027 SM_b20028: SM_b20028 - hypothetical protein, at 39,374 to 40,510 _b20028 SM_b20029: SM_b20029 - hypothetical protein, at 40,950 to 41,423 _b20029 SM_b20030: SM_b20030 - RNA polymerase sigma factor SigJ, at 41,423 to 42,280 _b20030
Group Condition SM_b20026 SM_b20027 SM_b20028 SM_b20029 SM_b20030
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.3 -0.1 +0.1 +0.2 -0.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -1.7 -0.3 -0.1 -0.5 +0.2
stress Cisplatin 0.001 mg/ml -1.8 +0.1 -0.3 -0.0 -0.1
carbon source methyl 3-keto-a-D-glucopyranoside (C) -1.5 +0.3 +0.1 -0.8 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -0.1 +0.2 -0.3 -0.1
carbon source succinate (C) -1.8 +0.1 +0.0 -0.0 -0.1
stress nitrate 40 mM -1.0 +0.1 -0.4 -0.3 -0.2
carbon source methyl-beta-D-xylopyranoside (C) -1.4 -0.1 -0.1 -0.3 +0.2
stress Nickel (II) chloride 1 mM -1.2 -0.0 +0.0 -0.2 -0.1
carbon source succinate (C) -0.6 -0.1 +0.0 -0.7 -0.2
stress copper (II) chloride 1 mM -0.3 +0.1 +0.1 -0.7 -0.6
dmso control DMSO control -1.7 -0.1 +0.1 +0.1 +0.2
stress Chlorite 0.1 mM -1.0 +0.1 -0.1 -0.4 +0.1
carbon source 5-Aminovaleric (C) -1.0 -0.2 -0.0 +0.1 +0.3
carbon source D-Ribose (C) -0.9 +0.0 +0.1 -0.2 +0.3
stress Fusidic 0.0001 mg/ml -0.6 +0.1 +0.1 +0.4 -0.5
carbon source D-Cellobiose (C) -0.8 -0.1 -0.1 +0.2 +0.2
carbon source Xylobiose (C) -0.7 -0.1 +0.0 -0.2 +0.5
pH LB, pH7 -0.4 -0.1 -0.0 +0.7 -0.3
carbon source Beta-Lactose (C) -0.7 +0.1 -0.1 +0.3 +0.4
stress Polymyxin B sulfate 0.00005 mg/ml +0.6 -0.3 -0.2 -0.7 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 -0.2 +0.1 -0.5 -0.1
carbon source L-Fucose (C) +0.9 -0.1 -0.1 -0.1 -0.5
nutrient L-Histidine -0.7 +0.2 +0.1 +0.0 +0.5
pH LB, pH7 +0.8 +0.1 +0.1 -0.1 -0.5
lb LB +1.1 +0.0 +0.1 -0.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -0.1 +0.2 +0.5 +1.1
nitrogen source L-Glutamine (N) +0.7 +0.1 +0.0 +0.4 +0.2
nitrogen source L-Serine (N) +0.6 +0.0 +0.1 +0.5 +0.3
nitrogen source L-Arginine (N) +1.0 +0.6 +0.2 -0.3 +0.2
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