Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 243 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
SM_b20008 and SM_b20009 overlap by 14 nucleotides
SM_b20009 and SM_b20010 are separated by 94 nucleotides
SM_b20010 and SM_b20011 are separated by 226 nucleotides
SM_b20011 and SM_b20012 are separated by 31 nucleotides
SM_b20008: SM_b20008 - ATP-dependent DNA ligase, at 12,297 to 13,364
_b20008
SM_b20009: SM_b20009 - transcriptional regulator, at 13,351 to 14,280
_b20009
SM_b20010: SM_b20010 - hypothetical protein, at 14,375 to 15,442
_b20010
SM_b20011: SM_b20011 - hypothetical protein, at 15,669 to 16,448
_b20011
SM_b20012: SM_b20012 - hypothetical protein, at 16,480 to 19,023
_b20012
Group
Condition
SM
_b20008
SM
_b20009
SM
_b20010
SM
_b20011
SM
_b20012
stress
Thallium(I) acetate 0.0025 mg/ml
-0.0
-0.7
-0.1
-0.8
-0.2
stress
Aluminum chloride
-0.4
-0.2
+0.2
-1.1
-0.2
stress
3-octanone 0.456 mM
-0.3
-0.2
-0.4
-0.7
-0.1
nitrogen source
NAG (N)
-0.2
-0.3
-0.2
-0.8
-0.1
stress
Cisplatin 0.0005 mg/ml
-0.2
-0.1
-0.2
-0.5
-0.2
stress
Thallium(I) acetate 0.001 mg/ml
-0.1
-0.4
-0.2
-0.5
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.2
-0.6
-0.6
+0.2
stress
Cisplatin 0.001 mg/ml
-0.2
-0.2
-0.8
+0.1
+0.1
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.3
+0.2
-0.4
-0.3
-0.2
stress
copper (II) chloride 1 mM
-0.5
+0.2
-1.0
+0.4
+0.1
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.1
-0.2
+0.2
-0.7
+0.0
stress
Chlorite 0.1 mM
+0.0
+0.2
+0.1
-0.9
-0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.2
-0.3
-0.5
+0.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.3
-0.1
-0.6
+0.3
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
-0.1
+0.5
-0.6
-0.0
stress
perchlorate 10 mM
-0.2
-0.3
-0.5
+0.4
+0.3
carbon source
Fumarate (C)
-0.1
+0.2
-0.4
+0.5
-0.4
carbon source
D-Mannitol (C)
-0.3
-0.1
-0.3
+0.6
-0.1
stress
Paraquat dichloride 0.05 mg/ml
+0.1
+0.3
-0.5
+0.3
+0.1
nutrient
Min media with glucose
-0.3
+0.2
-0.4
+0.7
+0.1
carbon source
pipercolic (C)
-0.1
+0.3
-0.4
+0.8
-0.2
nutrient
L-Lysine
+0.1
+0.3
-0.6
+0.4
+0.1
carbon source
L-Alanine (C)
-0.1
+0.3
-0.2
+0.6
-0.1
carbon source
5-Aminovaleric (C)
-0.0
+0.6
-0.6
+0.7
-0.2
stress
3-octanone 5.310333333 mM
+0.3
+0.3
-0.3
+0.4
+0.1
carbon source
Protocatechuic Acid (C)
-0.2
-0.1
+0.3
+0.7
+0.0
carbon source
D-Ribose (C)
-0.1
+0.5
+0.1
+0.5
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.3
+0.5
+0.4
+0.1
nitrogen source
L-Asparagine (N)
+0.4
+0.1
+0.6
+0.2
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.5
+0.2
+0.4
+0.8
+0.1
remove
SM_b20008
plot
remove
SM_b20009
plot
remove
SM_b20010
remove
SM_b20011
plot
remove
SM_b20012
plot