Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSM_b20005 and SM_b20006 are separated by 185 nucleotidesSM_b20006 and SM_b20007 are separated by 114 nucleotidesSM_b20007 and SM_b20008 are separated by 25 nucleotidesSM_b20008 and SM_b20009 overlap by 14 nucleotides SM_b20005: SM_b20005 - glutathione S-transferase, at 8,289 to 8,900 _b20005 SM_b20006: SM_b20006 - hypothetical protein, at 9,086 to 10,039 _b20006 SM_b20007: SM_b20007 - catalase C protein, at 10,154 to 12,271 _b20007 SM_b20008: SM_b20008 - ATP-dependent DNA ligase, at 12,297 to 13,364 _b20008 SM_b20009: SM_b20009 - transcriptional regulator, at 13,351 to 14,280 _b20009
Group Condition SM_b20005 SM_b20006 SM_b20007 SM_b20008 SM_b20009
stress Cisplatin 0.0005 mg/ml -0.9 +0.0 -0.3 -0.2 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -0.9 -0.1 -0.3 +0.3
stress Paraquat dichloride 0.2 mg/ml -0.2 -0.7 +0.0 -0.1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -0.4 -0.2 -0.1 -0.1
temperature LB, 23C -0.6 -0.5 -0.0 -0.3 +0.1
stress perchlorate 10 mM -0.6 +0.1 -0.3 -0.2 -0.3
stress Thallium(I) acetate 0.001 mg/ml -0.6 -0.1 +0.1 -0.1 -0.4
stress 3-octanone 0.456 mM -0.5 +0.1 -0.3 -0.3 -0.2
lb LB -0.6 -0.6 +0.1 +0.0 -0.0
carbon source Beta-Lactose (C) -0.9 -0.2 -0.1 +0.1 +0.0
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.7 -0.1 -0.3 -0.3 +0.2
stress D-Cycloserine 0.05 mg/ml -0.4 -0.6 +0.0 -0.3 +0.4
nitrogen source Gelatin (N) -0.3 -0.8 +0.1 +0.2 +0.0
nitrogen source D-Glucosamine Hydrochloride (N) -0.1 -0.9 +0.3 +0.0 +0.0
pH LB, pH7 -0.3 -0.5 -0.1 -0.1 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.8 -0.3 +0.2 -0.1
stress nitrate 40 mM -0.6 +0.4 -0.1 -0.2 -0.1
carbon source Myristic (C) -0.3 -0.5 +0.4 -0.1 +0.1
stress Thallium(I) acetate 0.0025 mg/ml -0.2 +0.3 +0.2 -0.0 -0.7
nitrogen source L-Glutamine (N) +0.2 -0.6 -0.3 +0.3 +0.3
carbon source D-Ribose (C) -0.7 +0.1 +0.2 -0.0 +0.3
nutrient L-Histidine -0.6 +0.1 -0.1 +0.1 +0.5
stress copper (II) chloride 1 mM -0.2 -0.2 +0.7 -0.5 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 +0.8 +0.1 +0.1 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 +0.4 +0.1 +0.5 +0.2
r2a control R2A control for volatile experiments +0.9 +0.1 -0.2 -0.1 +0.1
carbon source D-Xylose (C) +0.4 +0.3 +0.1 -0.2 +0.3
stress Polymyxin B sulfate 0.00005 mg/ml -0.3 +0.5 +0.3 +0.1 +0.3
nitrogen source L-Asparagine (N) +0.5 -0.3 +0.3 +0.4 +0.1
nitrogen source L-Histidine (N) +0.7 +0.3 -0.2 +0.2 +0.3
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