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Cofit
Protein
Homologs
Fitness for 5 genes in
Synechocystis sp000284455 PCC 6803
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SGL_RS11030 and SGL_RS11035 are separated by 76 nucleotides
SGL_RS11035 and SGL_RS11040 are separated by 118 nucleotides
SGL_RS11040 and SGL_RS11045 are separated by 202 nucleotides
SGL_RS11045 and SGL_RS11050 are separated by 26 nucleotides
SGL_RS11030: SGL_RS11030 - DUF433 domain-containing protein, at 1,937,086 to 1,937,397
_RS11030
SGL_RS11035: SGL_RS11035 - LapA family protein, at 1,937,474 to 1,938,310
_RS11035
SGL_RS11040: SGL_RS11040 - TMEM165/GDT1 family protein, at 1,938,429 to 1,938,782
_RS11040
SGL_RS11045: SGL_RS11045 - glutathione peroxidase, at 1,938,985 to 1,939,494
_RS11045
SGL_RS11050: SGL_RS11050 - DUF3493 domain-containing protein, at 1,939,521 to 1,939,781
_RS11050
Group
Condition
SGL
_RS11030
SGL
_RS11035
SGL
_RS11040
SGL
_RS11045
SGL
_RS11050
light_bubbling
high light; bubbling
N.D.
-2.1
-4.4
-0.5
N.D.
light_bubbling
high light; bubbling
N.D.
-1.5
-5.5
+0.2
N.D.
light_bubbling
high light; bubbling
N.D.
-1.4
-4.8
-0.4
N.D.
photoheterotrophic
growth in full media and 10 mM glucose= photoheterotrophic growth but diluted to prevent slight attenuation and replinshing of glucose
N.D.
-1.4
-4.0
-1.1
N.D.
carbon dioxide
growth in full media bubbled with ambient air
N.D.
-2.4
-3.2
-0.6
N.D.
light_bubbling
low light; bubbling
N.D.
-1.8
-4.1
-0.2
N.D.
light_bubbling
low light; bubbling
N.D.
-1.4
-4.2
-0.3
N.D.
nitrogen source
nitrite (N)
N.D.
-5.9
+0.4
-0.3
N.D.
nitrogen source
Urea (N)
N.D.
-5.4
-0.3
+0.0
N.D.
nitrogen source
growth in full media and 10 mM glucose= photomixotrophic growth
N.D.
-1.5
-2.4
-1.4
N.D.
light_bubbling
low light; bubbling
N.D.
-1.7
-3.9
+0.2
N.D.
light_bubbling
medium light; bubbling
N.D.
-1.0
-3.9
-0.4
N.D.
light_bubbling
low light; bubbling
N.D.
-2.6
-1.8
-0.4
N.D.
carbon dioxide
growth in full media bubbled with ambient air but diluted to prevent light attenuation
N.D.
-3.0
-3.0
+1.2
N.D.
light_bubbling
medium light; bubbling
N.D.
+0.0
-4.9
+0.3
N.D.
light_bubbling
high light; bubbling
N.D.
-0.3
-4.0
+0.5
N.D.
stress
m-arsenite 5 mM
N.D.
-3.9
+0.2
-0.1
N.D.
nitrogen source
Guanidine Hydrochloride (N)
N.D.
-3.8
+0.4
-0.4
N.D.
light_bubbling
medium light; bubbling
N.D.
+0.6
-3.7
-0.3
N.D.
photoheterotrophic
growth in full media and 10 mM glucose= photoheterotrophic growth
N.D.
-1.7
-1.1
-0.5
N.D.
stress
Nickel (II) sulfate 3 uM
N.D.
-2.4
-0.5
-0.3
N.D.
nitrogen source
nitrate (N)
N.D.
-2.2
-0.3
-0.5
N.D.
metal stress
growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation
N.D.
-2.8
-0.1
+0.1
N.D.
light_bubbling
medium light; bubbling
N.D.
+0.0
-3.5
+0.7
N.D.
light_bubbling
low light; bubbling
N.D.
-1.7
-1.3
+0.4
N.D.
carbon dioxide
growth in full media bubbled with ambient air
N.D.
-1.9
-1.0
+0.5
N.D.
light_bubbling
high light; bubbling
N.D.
-1.0
-1.6
+0.4
N.D.
stress
Nickel (II) sulfate 5 uM
N.D.
-2.3
-0.2
+0.4
N.D.
stress
Copper (II) sulfate 3 uM
N.D.
-2.1
+1.1
-0.2
N.D.
metal stress
growth in full media supplemented with 3 .M CuSO4 but diluted to prevent light attenuation
N.D.
-1.8
+1.1
-0.5
N.D.
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