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Fitness for 5 genes in
Synechocystis sp000284455 PCC 6803
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SGL_RS08030 and SGL_RS08035 are separated by 57 nucleotides
SGL_RS08035 and SGL_RS08040 are separated by 248 nucleotides
SGL_RS08040 and SGL_RS08045 are separated by 215 nucleotides
SGL_RS08045 and SGL_RS08055 are separated by 293 nucleotides
SGL_RS08030: SGL_RS08030 - glucose-6-phosphate dehydrogenase assembly protein OpcA, at 1,316,227 to 1,317,654
_RS08030
SGL_RS08035: SGL_RS08035 - amino acid ABC transporter ATP-binding protein, at 1,317,712 to 1,318,470
_RS08035
SGL_RS08040: SGL_RS08040 - transcriptional repressor LexA, at 1,318,719 to 1,319,330
_RS08040
SGL_RS08045: SGL_RS08045 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit, at 1,319,546 to 1,320,541
_RS08045
SGL_RS08055: SGL_RS08055 - two-component system response regulator, at 1,320,835 to 1,321,839
_RS08055
Group
Condition
SGL
_RS08030
SGL
_RS08035
SGL
_RS08040
SGL
_RS08045
SGL
_RS08055
nitrogen source
L-Arginine (N)
+0.0
+0.8
N.D.
-8.3
-0.2
light_bubbling
medium light; bubbling
-0.5
-1.5
N.D.
-2.0
-1.2
photoheterotrophic
growth in full media and 10 mM glucose= photoheterotrophic growth but diluted to prevent slight attenuation and replinshing of glucose
-1.5
-1.2
N.D.
-1.9
-0.3
nitrogen source
Arg 10 mM as N source, buffered with TES 20 mM TES pH8 but diluted to prevent light attenuation
+0.1
+1.0
N.D.
-6.0
+0.2
light_bubbling
high light; bubbling
-0.8
-1.4
N.D.
-1.3
-1.0
light_bubbling
medium light; bubbling
-0.4
-1.3
N.D.
-1.1
-1.1
light_bubbling
high light; bubbling
-0.5
-0.9
N.D.
-1.2
-0.9
light_bubbling
high light; bubbling
-0.8
-1.0
N.D.
-0.7
-0.7
carbon dioxide
growth in full media bubbled with ambient air but diluted to prevent light attenuation
-0.5
-0.9
N.D.
-1.2
-0.5
light_bubbling
medium light; bubbling
-0.3
-0.9
N.D.
-1.3
-0.6
nitrogen source
growth in full media and 10 mM glucose= photomixotrophic growth
+0.0
-1.3
N.D.
-1.5
-0.3
light_bubbling
medium light; bubbling
-0.4
-1.2
N.D.
-0.8
-0.6
light_bubbling
high light; bubbling
-0.3
-1.0
N.D.
-1.0
-0.7
nitrogen source
Arg 10 mM as N source, buffered with TES 20 mM TES pH8 but diluted to prevent light attenuation
-0.0
+1.7
N.D.
-4.6
+0.0
light_bubbling
low light; bubbling
-0.3
-1.3
N.D.
-0.8
-0.3
nitrogen source
Arg 10 mM as N source, buffered with 20 mM TES pH8
-0.2
+0.5
N.D.
-2.8
-0.1
photoheterotrophic
growth in full media and 10 mM glucose= photoheterotrophic growth
-1.1
-0.2
N.D.
-1.0
-0.2
light_bubbling
high light; bubbling
-0.4
-0.9
N.D.
-0.6
-0.6
nitrogen source
L-Proline (N); from biofilm
+0.0
-0.5
N.D.
-1.9
-0.1
light_bubbling
high light; bubbling
-0.3
-0.8
N.D.
-0.6
-0.6
light_bubbling
low light; bubbling
-0.2
-0.9
N.D.
-0.6
-0.3
light_bubbling
low light; bubbling
-0.3
-0.7
N.D.
-0.5
-0.3
carbon dioxide
growth in full media bubbled with ambient air
-0.1
-0.7
N.D.
-0.7
-0.1
nitrogen source
Inoculated in media lacking a N source and incubated for 1 week, NaNo3 added and recovered for 3 days
-0.1
-0.5
N.D.
-0.8
-0.2
light_bubbling
low light; bubbling
-0.3
-0.3
N.D.
-0.5
-0.4
nitrogen source
L-Proline (N)
-0.0
-0.3
N.D.
-1.1
+0.0
nitrogen source
Guanidine Hydrochloride (N)
-0.4
-0.2
N.D.
-0.8
+0.0
nitrogen source
Arg 10 mM as N source, buffered with 20 mM TES pH8
+0.0
+1.3
N.D.
-2.3
+0.1
nitrogen source
nitrite (N)
+0.2
+0.3
N.D.
+1.0
-0.0
stress
D-Sorbitol 500 mM
+0.2
+0.5
N.D.
+1.0
+0.2
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