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Protein
Homologs
Fitness for 5 genes in
Synechocystis sp000284455 PCC 6803
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SGL_RS05400 and SGL_RS05405 are separated by 555 nucleotides
SGL_RS05405 and SGL_RS05410 are separated by 48 nucleotides
SGL_RS05410 and SGL_RS05415 overlap by 50 nucleotides
SGL_RS05415 and SGL_RS05420 are separated by 156 nucleotides
SGL_RS05400: SGL_RS05400 - Crp/Fnr family transcriptional regulator, at 754,877 to 755,497
_RS05400
SGL_RS05405: SGL_RS05405 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 756,053 to 757,195
_RS05405
SGL_RS05410: SGL_RS05410 - type II secretion system protein, at 757,244 to 757,720
_RS05410
SGL_RS05415: SGL_RS05415 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 757,671 to 758,753
_RS05415
SGL_RS05420: SGL_RS05420 - hypothetical protein, at 758,910 to 761,228
_RS05420
Group
Condition
SGL
_RS05400
SGL
_RS05405
SGL
_RS05410
SGL
_RS05415
SGL
_RS05420
nitrogen source
nitrite (N)
-2.2
-1.8
-1.0
-2.5
-2.0
nitrogen source
growth in full media and 10 mM glucose= photomixotrophic growth
-2.5
-1.8
-2.2
-1.5
-1.4
photoheterotrophic
growth in full media and 10 mM glucose= photoheterotrophic growth but diluted to prevent slight attenuation and replinshing of glucose
-2.1
-1.1
-0.5
-1.4
-0.9
light_bubbling
high light; bubbling
-1.9
-0.7
-0.6
-1.5
-0.6
light_bubbling
high light; bubbling
-1.2
-0.9
-0.9
-1.1
-0.8
light_bubbling
medium light; bubbling
-3.0
-0.1
-0.5
-1.2
+0.6
nitrogen source
L-Proline (N); from biofilm
-0.9
-0.6
-0.7
-0.7
-0.9
light_bubbling
high light; bubbling
-0.8
-0.8
-1.0
-1.1
-0.1
light_bubbling
high light; bubbling
-1.4
-0.5
-1.2
-0.3
-0.3
photoheterotrophic
growth in full media and 10 mM glucose= photoheterotrophic growth
-1.2
-0.6
-0.9
-0.3
-0.6
light_bubbling
low light; bubbling
-2.8
-0.4
-0.3
-0.5
+0.4
metal stress
growth in full media supplemented with 5 .M CuSO4
-0.9
-0.8
-0.8
-0.4
-0.6
metal stress
growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation
-0.3
-0.8
-0.6
-0.7
-0.6
light_bubbling
high light; bubbling
-1.1
-0.5
+0.0
-0.8
-0.3
light_bubbling
high light; bubbling
-0.7
-0.8
-0.8
-0.1
-0.2
light_bubbling
medium light; bubbling
-0.8
-0.5
-0.3
-0.7
-0.2
metal stress
growth in full media supplemented with 3 .M CuSO4
-0.8
-0.6
-0.8
+0.1
-0.4
metal stress
growth in full media supplemented with 3 .M CuSO4 but diluted to prevent light attenuation
-1.0
-0.5
-0.7
+0.2
-0.4
light_bubbling
low light; bubbling
-1.4
-0.2
-0.3
-0.5
+0.1
light_bubbling
low light; bubbling
-1.1
-0.2
-0.3
-0.5
-0.1
stress
D-Sorbitol 500 mM
-1.3
-0.1
-0.5
-0.3
+0.1
nitrogen source
L-Proline (N)
-1.3
-0.1
+0.1
-0.5
-0.2
light_bubbling
low light; bubbling
-1.8
+0.0
+0.2
-0.4
+0.2
light_bubbling
medium light; bubbling
-0.2
-0.5
+0.4
-1.5
+0.0
nitrogen source
Inoculated in media lacking a N source and incubated for 1 week, NaNo3 added and recovered for 3 days
-1.2
-0.1
-0.5
+0.2
+0.1
stress
Nickel (II) sulfate 3 uM
-0.8
+0.1
+0.7
+0.3
+0.3
nitrogen source
L-Arginine (N)
-0.7
+0.5
+0.5
+0.4
+0.6
stress
Manganese (II) chloride tetrahydrate 150 uM
+0.3
+0.7
+0.5
+0.7
+0.6
nitrogen source
L-Glutamic Acid Monosodium Salt Monohydrate (N); from biofilm
+0.4
+0.8
+0.7
+0.3
+0.8
stress
Ethanol 2 vol%
+1.2
+1.4
+1.1
+1.3
+1.4
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