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Protein
Homologs
Fitness for 5 genes in
Synechocystis sp000284455 PCC 6803
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SGL_RS05390 and SGL_RS05395 are separated by 247 nucleotides
SGL_RS05395 and SGL_RS05400 are separated by 142 nucleotides
SGL_RS05400 and SGL_RS05405 are separated by 555 nucleotides
SGL_RS05405 and SGL_RS05410 are separated by 48 nucleotides
SGL_RS05390: SGL_RS05390 - Na(+)/H(+) antiporter subunit B, at 752,532 to 753,179
_RS05390
SGL_RS05395: SGL_RS05395 - DUF58 domain-containing protein, at 753,427 to 754,734
_RS05395
SGL_RS05400: SGL_RS05400 - Crp/Fnr family transcriptional regulator, at 754,877 to 755,497
_RS05400
SGL_RS05405: SGL_RS05405 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 756,053 to 757,195
_RS05405
SGL_RS05410: SGL_RS05410 - type II secretion system protein, at 757,244 to 757,720
_RS05410
Group
Condition
SGL
_RS05390
SGL
_RS05395
SGL
_RS05400
SGL
_RS05405
SGL
_RS05410
photoheterotrophic
growth in full media and 10 mM glucose= photoheterotrophic growth but diluted to prevent slight attenuation and replinshing of glucose
-5.3
+0.3
-2.0
-1.1
-0.5
metal stress
growth in full media supplemented with 5 .M Cl2Co but diluted to prevent light attenuation
-6.2
+0.0
-0.5
-0.0
+0.0
nitrogen source
growth in full media but diluted to prevent light attenuation
-6.2
+0.0
-0.2
-0.0
-0.2
photoheterotrophic
growth in full media and 10 mM glucose= photoheterotrophic growth
-3.7
+0.1
-1.2
-0.6
-0.9
nitrogen source
Na NO3 10 mM as N source, buffered with 20 mM TES pH8 but diluted to prevent light attenuation
-5.3
-0.0
-0.1
-0.2
-0.3
growth in full media but diluted to prevent light attenuation
-5.5
+0.2
-0.2
+0.1
-0.4
metal stress
growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
-5.1
+0.0
-0.0
-0.2
-0.3
metal stress
growth in full media supplemented with 3 .M Cl2Co but diluted to prevent light attenuation
-5.0
-0.0
-0.2
-0.2
-0.2
nitrogen source
growth in full media and 10 mM glucose= photomixotrophic growth
+1.0
+0.2
-2.5
-1.8
-2.2
metal stress
growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
-4.4
+0.1
-0.1
-0.2
-0.6
nitrogen source
NaNO3 10 mM as N source, buffered with TES 20 mM TES pH8
-4.9
+0.1
-0.4
+0.0
-0.0
carbon dioxide
growth in full media
-4.8
+0.1
-0.3
-0.2
+0.0
metal stress
growth in full media supplemented with 300 .M BCSA to remove any trace of Cu but diluted to prevent light attenuation
-5.2
+0.0
+0.5
-0.2
-0.1
carbon dioxide
growth in full media bubbled with ambient air but diluted to prevent light attenuation
-6.0
+0.2
+0.3
+0.6
-0.1
carbon dioxide
growth in full media but diluted to prevent light attenuation
-4.7
+0.0
+0.3
-0.0
-0.3
metal stress
growth in full media but diluted to prevent light attenuation
-4.5
-0.0
+0.1
-0.0
-0.3
nitrogen source
growth in full media
-4.1
+0.0
-0.3
-0.1
+0.1
carbon dioxide
growth in full media bubbled with ambient air
-5.2
+0.1
+0.1
+0.5
+0.0
carbon dioxide
growth in full media bubbled with air enriched in 5% CO2
-4.6
+0.2
+0.0
-0.1
+0.2
metal stress
Synechocystis_PCC6803_ML3a diversity barseq (outgrowth of original library)
-4.8
+0.2
+0.0
-0.0
+0.3
metal stress
growth in full media supplemented with 5mM sodum metaarsenite
-3.7
-0.0
+0.5
+0.0
-0.3
metal stress
growth in full media supplemented with 300 .M BCSA to remove any trace of Cu but diluted to prevent light attenuation
-3.3
+0.1
+0.4
-0.3
-0.3
carbon dioxide
growth in full media bubbled with ambient air
-3.7
+0.2
-0.2
+0.5
-0.1
metal stress
growth in full media but diluted to prevent light attenuation
-3.6
+0.2
+0.3
-0.0
-0.1
metal stress
growth in full media supplemented with 2mM sodum metaarsenite
-3.3
+0.2
+0.3
-0.0
-0.4
metal stress
growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation
-3.0
+0.1
+1.0
+0.1
-0.0
metal stress
growth in full media supplemented with 5 .M CuSO4
+2.4
+0.2
-0.8
-0.8
-0.8
metal stress
growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation
+2.5
+0.1
-0.3
-0.8
-0.6
metal stress
growth in full media supplemented with 3 .M CuSO4 but diluted to prevent light attenuation
+3.5
+0.3
-1.0
-0.5
-0.7
metal stress
growth in full media supplemented with 3 .M CuSO4
+3.9
+0.2
-0.8
-0.6
-0.7
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