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Cofit
Protein
Homologs
Fitness for 5 genes in
Synechocystis sp000284455 PCC 6803
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SGL_RS03560 and SGL_RS03565 are separated by 34 nucleotides
SGL_RS03565 and SGL_RS03570 are separated by 50 nucleotides
SGL_RS03570 and SGL_RS03575 are separated by 151 nucleotides
SGL_RS03575 and SGL_RS19770 are separated by 163 nucleotides
SGL_RS03560: SGL_RS03560 - class I SAM-dependent methyltransferase, at 355,990 to 357,210
_RS03560
SGL_RS03565: SGL_RS03565 - DUF29 domain-containing protein, at 357,245 to 357,697
_RS03565
SGL_RS03570: SGL_RS03570 - Uma2 family endonuclease, at 357,748 to 358,608
_RS03570
SGL_RS03575: SGL_RS03575 - Uma2 family endonuclease, at 358,760 to 359,350
_RS03575
SGL_RS19770: SGL_RS19770 - DUF4160 domain-containing protein, at 359,514 to 359,663
_RS19770
Group
Condition
SGL
_RS03560
SGL
_RS03565
SGL
_RS03570
SGL
_RS03575
SGL
_RS19770
nitrogen source
Urea (N)
-7.0
-1.7
-6.3
-0.2
N.D.
light_bubbling
low light; bubbling
-9.8
+0.3
-0.6
-0.5
N.D.
control
control
-9.7
-0.1
-0.9
+0.1
N.D.
nitrogen source
Guanidine Hydrochloride (N)
-9.8
+0.1
-0.6
+0.1
N.D.
light_bubbling
low light; bubbling
-9.5
+0.3
-0.4
-0.3
N.D.
light_bubbling
low light; bubbling
-9.7
+0.2
+0.2
-0.2
N.D.
stress
Nickel (II) sulfate 3 uM
-9.1
+0.0
-0.4
+0.3
N.D.
stress
Copper (II) sulfate 5 uM
-8.9
+0.3
-0.8
+0.3
N.D.
light_bubbling
high light; bubbling
-9.2
+0.4
-0.2
-0.1
N.D.
stress
Nickel (II) sulfate 5 uM
-8.2
+0.1
-0.7
+0.1
N.D.
stress
Copper (II) sulfate 3 uM
-8.1
+0.4
-0.6
-0.3
N.D.
light_bubbling
high light; bubbling
-8.6
+0.5
-0.2
-0.4
N.D.
light_bubbling
control for light_bubbling experiments
-9.2
+0.2
+0.3
+0.4
N.D.
light_bubbling
medium light; bubbling
-8.3
+0.5
+0.1
-0.3
N.D.
stress
D-Sorbitol 500 mM
-7.6
+0.3
-0.3
-0.4
N.D.
light_bubbling
low light; bubbling
-9.1
+0.3
+0.7
+0.6
N.D.
light_bubbling
low light; bubbling
-8.8
+0.3
+1.2
-0.2
N.D.
nitrogen source
L-Glutamic Acid Monosodium Salt Monohydrate (N); from biofilm
-7.2
+0.1
-0.3
-0.1
N.D.
nitrogen source
no (N) 1 week recovered
-6.5
+0.1
-1.0
+0.0
N.D.
nitrogen source
L-Glutamic Acid Monosodium Salt Monohydrate (N)
-8.3
+0.2
+0.2
+0.6
N.D.
stress
D-Sorbitol 500 mM
-6.9
+0.2
-0.3
-0.2
N.D.
nitrogen source
nitrate (N)
-7.2
+0.4
-0.3
-0.0
N.D.
metal stress
growth in full media supplemented with 3 .M Cl2Co but diluted to prevent light attenuation
-6.7
-0.0
+0.1
-0.5
N.D.
light_bubbling
high light; bubbling
-6.6
+0.3
-0.4
-0.4
N.D.
stress
D-Sorbitol 500 mM
-6.7
+0.0
-0.3
+0.3
N.D.
light_bubbling
high light; bubbling
-6.8
+0.4
+0.4
-0.2
N.D.
carbon dioxide
growth in full media bubbled with ambient air but diluted to prevent light attenuation
-5.8
+0.2
+0.4
-1.0
N.D.
light_bubbling
medium light; bubbling
-5.2
+0.6
+0.9
-2.3
N.D.
light_bubbling
medium light; bubbling
-6.9
+0.7
+1.0
-0.6
N.D.
carbon dioxide
growth in full media bubbled with ambient air
-5.5
-0.1
+1.2
-0.7
N.D.
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