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Cofit
Protein
Homologs
Fitness for 5 genes in
Synechocystis sp000284455 PCC 6803
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SGL_RS03080 and SGL_RS19410 are separated by 20 nucleotides
SGL_RS19410 and SGL_RS03085 are separated by 60 nucleotides
SGL_RS03085 and SGL_RS03090 are separated by 116 nucleotides
SGL_RS03090 and SGL_RS03095 are separated by 55 nucleotides
SGL_RS03080: SGL_RS03080 - transaldolase, at 260,463 to 261,638
_RS03080
SGL_RS19410: SGL_RS19410 - hypothetical protein, at 261,659 to 261,802
_RS19410
SGL_RS03085: SGL_RS03085 - DUF2862 domain-containing protein, at 261,863 to 262,060
_RS03085
SGL_RS03090: SGL_RS03090 - ArsA family ATPase, at 262,177 to 263,265
_RS03090
SGL_RS03095: SGL_RS03095 - peptide-methionine (S)-S-oxide reductase MsrA, at 263,321 to 263,965
_RS03095
Group
Condition
SGL
_RS03080
SGL
_RS19410
SGL
_RS03085
SGL
_RS03090
SGL
_RS03095
nitrogen source
L-Arginine (N)
+0.2
+0.4
-0.7
-9.9
+0.1
light_bubbling
low light; bubbling
-0.4
+0.1
-6.5
-3.2
+0.1
stress
Nickel (II) sulfate 3 uM
+0.1
+0.1
-5.3
-4.3
+0.0
control
control
+0.1
+0.1
-5.7
-3.8
+0.0
stress
Zinc 20 uM
+0.1
+0.1
-5.9
-3.3
-0.1
nitrogen source
nitrite (N)
+0.0
+0.1
-4.4
-4.8
-0.2
light_bubbling
low light; bubbling
+0.1
-0.5
-5.5
-3.2
+0.2
stress
Zinc 15 uM
+0.1
+0.4
-5.8
-2.9
-0.1
stress
m-arsenite 5 mM
+0.0
+0.3
-5.8
-2.3
-0.1
light_bubbling
medium light; bubbling
-0.7
-0.5
-4.7
-2.5
+0.6
stress
Manganese (II) chloride tetrahydrate 100 uM
+0.1
+0.3
-5.9
-1.9
-0.1
nitrogen source
Urea (N)
+0.3
+0.3
-5.9
-1.8
-0.0
nitrogen source
L-Glutamic Acid Monosodium Salt Monohydrate (N)
+0.3
+0.1
-5.4
-2.0
+0.0
no stress control
no stress control
+0.2
+0.2
-5.2
-2.1
-0.0
stress
Copper (II) sulfate 3 uM
+0.1
+0.2
-4.9
-2.2
-0.1
light_bubbling
low light; bubbling
+0.2
+0.1
-5.9
-1.1
-0.1
stress
Cobalt chloride 5 uM
+0.1
+0.3
-5.8
-1.1
-0.1
light_bubbling
medium light; bubbling
-0.3
+0.1
-5.5
-1.2
+0.4
light_bubbling
high light; bubbling
-1.3
-0.1
-4.5
-1.3
+0.7
stress
Manganese (II) chloride tetrahydrate 150 uM
+0.1
+0.3
-5.8
-1.2
-0.1
stress
Cobalt chloride 3 uM
+0.1
+0.4
-5.8
-1.0
-0.2
nitrogen source
nitrate (N)
+0.2
+0.4
-5.7
-1.2
-0.1
nitrogen source
Ammonium chloride (N)
+0.3
+0.2
-5.7
-1.0
+0.0
stress
Copper (II) sulfate 5 uM
+0.2
+0.1
-5.2
-1.4
+0.0
light_bubbling
low light; bubbling
+0.2
+0.2
-5.7
-1.0
+0.0
nitrogen source
Guanidine Hydrochloride (N)
+0.2
+0.2
-5.8
-0.4
-0.1
nitrogen source
L-Proline (N)
+0.0
+0.4
-4.5
-1.3
-0.1
nitrogen source
L-Glutamic Acid Monosodium Salt Monohydrate (N); from biofilm
+0.2
+0.4
-5.0
-0.9
-0.0
light_bubbling
high light; bubbling
-0.0
+0.2
-5.5
+0.4
-0.3
carbon dioxide
growth in media lacking HCO3 but diluted to prevent light attenuation
+0.1
+0.6
-4.3
-1.4
+0.1
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