Fitness for 5 genes in Mycobacterium tuberculosis H37Rv

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500 ntRv3401 and Rv3402c are separated by 250 nucleotidesRv3402c and Rv3403c are separated by 370 nucleotidesRv3403c and Rv3404c are separated by 16 nucleotidesRv3404c and Rv3405c are separated by 117 nucleotides Rv3401: Rv3401 - Conserved protein, at 3,818,042 to 3,820,402 Rv3401 Rv3402c: Rv3402c - Conserved hypothetical protein, at 3,820,653 to 3,821,891 Rv3402c Rv3403c: Rv3403c - Hypothetical protein, at 3,822,262 to 3,823,863 Rv3403c Rv3404c: Rv3404c - Conserved hypothetical protein, at 3,823,880 to 3,824,584 Rv3404c Rv3405c: Rv3405c - Possible transcriptional regulatory protein, at 3,824,702 to 3,825,268 Rv3405c
Group Condition Rv3401 Rv3402c Rv3403c Rv3404c Rv3405c
stress 7H9 with Levofloxacin 0.3 ug/mL +0.0 -0.0 +0.2 -0.1 -2.9
stress 7H9 with Novobiocin 0.004 mM -0.1 -0.0 +0.2 +0.1 -2.5
stress 7H9 with Novobiocin 0.004 mM +0.1 +0.2 +0.0 +0.2 -2.7
stress 7H9 with Hydrogen peroxide 2.5 mM; pH 5.5 +0.0 -0.2 -0.0 +0.1 -2.1
stress 7H9 with nitrate 4 mM +0.0 -0.1 +0.0 -0.1 -1.5
stress 7H9 with Ethionamide 0.1 ug/mL +0.0 -0.1 -0.1 +0.0 -1.6
stress 7H9 with Amikacin di2 ug/mL -0.0 -0.2 -0.1 +0.1 -1.3
stress 7H9 with nitrite 3 mM; pH 5.5 -0.3 -0.2 +0.1 +0.1 -1.1
stress 7H9 with Formaldehyde 0.23 mM +0.0 -0.0 -0.2 -0.1 -1.2
stress 7H9 with Isoniazid 0.025 ug/mL +0.0 -0.1 -0.0 +0.1 -1.4
no stress control no stress control +0.1 -0.0 -0.2 +0.1 -1.4
stress 7H9 with Cloxacillin 0.0386 mM +0.1 +0.0 +0.2 +0.1 -1.7
stress 7H9 with Phenazine ethosulfate 0.0137 mM -0.0 -0.0 -0.0 -0.1 -1.2
stress 7H9 with nitrite 1.5 mM; pH 5.5 -0.1 +0.1 -0.0 +0.1 -1.3
stress 7H9 with 2,4-Dinitrophenol 0.1503 mM +0.1 +0.2 -0.0 +0.1 -1.4
stress 7H9 with Lomefloxacin 0.0035 mM -0.1 +0.1 +0.1 +0.1 -1.2
pH pH 4.5 +0.2 -0.2 -0.2 -0.0 -0.8
stress 7H9 with Moxifloxacin 0.121 ug/mL +0.1 +0.1 -0.0 +0.0 -1.0
stress 7H9 with 2-bromo-2-nitro-1,3-propanediol 0.1 mM +0.1 +0.2 -0.0 +0.1 -1.0
carbon source Stearic 100 uM (C) +0.1 -0.0 +0.2 +0.0 -0.9
stress 7H9 with copper (II) chloride 0.08 mM +0.1 +0.1 +0.3 -0.0 -1.2
stress 7H9 with Chloramphenicol 0.01 mM +0.1 +0.1 +0.2 -0.1 -0.9
stress 7H9 with Lomefloxacin 0.0035 mM -0.1 +0.1 +0.3 +0.2 -1.0
stress 7H9 with Ceftriaxone hemi(heptahydrate) 0.12 mM +0.1 -0.1 +0.3 +0.0 -0.9
stress 7H9 with 2,4-Dinitrophenol 0.1503 mM +0.2 +0.1 -0.0 +0.1 -0.7
stress 7H9 with Econazole nitrate salt 0.0082 mM +0.1 +0.3 +0.2 -0.1 -0.6
stress 7H9 with copper (II) chloride 0.08 mM +0.1 +0.3 +0.3 +0.2 -0.6
carbon source cholesterol 100uM (C) -0.3 -0.1 +0.1 -0.1 +0.8
carbon source D-Trehalose 10 mM (C) -0.1 +0.1 -0.0 -0.0 +1.0
stress 7H9 with Menadione 0.005 mM +0.1 +0.0 -0.1 -0.1 +1.1
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