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Fitness for 5 genes in
Mycobacterium tuberculosis H37Rv
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rv2973c and Rv2974c are separated by 2 nucleotides
Rv2974c and Rv2975c overlap by 4 nucleotides
Rv2975c and Rv2976c are separated by 458 nucleotides
Rv2976c and Rv2977c are separated by 32 nucleotides
Rv2973c: Rv2973c - Probable ATP-dependent DNA helicase RecG, at 3,327,733 to 3,329,946
Rv2973c
Rv2974c: Rv2974c - Conserved hypothetical alanine rich protein, at 3,329,949 to 3,331,361
Rv2974c
Rv2975c: Rv2975c - Conserved hypothetical protein, at 3,331,358 to 3,331,612
Rv2975c
Rv2976c: Rv2976c - Probable uracil-DNA glycosylase Ung (UDG), at 3,332,071 to 3,332,754
Rv2976c
Rv2977c: Rv2977c - Probable thiamine-monophosphate kinase ThiL (thiamine-phosphate kinase), at 3,332,787 to 3,333,788
Rv2977c
Group
Condition
Rv2973c
Rv2974c
Rv2975c
Rv2976c
Rv2977c
carbon source
butyrate 10 mM (C)
-0.6
-0.1
-1.3
-0.3
N.D.
carbon source
Palmitic 100 uM (C)
-0.5
-0.2
-1.6
+0.0
N.D.
stress
7H9 with Moxifloxacin 0.121 ug/mL
-0.4
-0.4
-1.0
-0.1
N.D.
carbon source
Glycerol (C)
-0.6
-0.1
-0.7
-0.3
N.D.
stress
7H9 with Clarithromycin 0.967 ug/mL
-0.4
+0.1
+0.2
-1.1
N.D.
carbon source
L-Aspartic Acid (C)
-0.3
-0.2
+0.3
-0.9
N.D.
carbon source
D-Glucose (C)
-0.6
+0.0
-0.6
+0.4
N.D.
stress
7H9 with Rifampicin 0.00045 ug/mL
-0.3
-0.0
-1.0
+0.6
N.D.
carbon source
Stearic 100 uM (C)
-0.1
-0.1
-0.9
+0.5
N.D.
stress
7H9 with Rifampicin 0.014 ug/mL
-0.4
-0.0
-0.5
+0.8
N.D.
stress
7H9 with Bedaquiline 0.15 ug/mL
-0.8
-0.1
+0.1
+0.6
N.D.
nitrogen source
L-Asparagine 10 mM (N)
-0.2
-0.1
-0.7
+0.9
N.D.
nitrogen source
L-Serine 10 mM (N)
-0.1
-0.1
-0.8
+0.9
N.D.
stress
7H9 with Ofloxacin 0.8 ug/mL
-0.2
-0.1
+1.0
-0.4
N.D.
carbon source
D-Trehalose 10 mM (C)
+0.1
-0.0
-0.9
+1.4
N.D.
stress
7H9 with Rifampicin 0.014 ug/mL
-0.2
-0.3
+0.5
+0.9
N.D.
nitrogen source
L-Glutamine 10 mM (N)
-0.0
-0.1
-0.4
+1.4
N.D.
carbon source
casaminos 1 mg/mL (C)
-0.5
+0.1
+1.0
+0.2
N.D.
stress
7H9 with para-aminosalicylic 0.086 ug/mL
-0.1
-0.2
+1.1
+0.2
N.D.
stress
7H9 with Pretomanid 0.213 ug/mL
-0.2
-0.2
+0.3
+1.3
N.D.
stress
7H9 with Linezolid 0.44 ug/mL
-0.3
-0.1
+0.8
+0.9
N.D.
nitrogen source
L-Glutamine 10 mM (N)
-0.2
-0.1
+0.8
+0.8
N.D.
nitrogen source
L-Asparagine 10 mM (N)
-0.3
-0.1
+0.2
+1.6
N.D.
carbon source
L-Lactate 10 mM (C)
-0.1
+0.1
+0.7
+0.9
N.D.
nitrogen source
L-Glutamic 10 mM (N)
+0.2
-0.2
+0.6
+1.0
N.D.
carbon source
D-Trehalose 10 mM (C)
-0.1
+0.0
+1.1
+0.6
N.D.
nitrogen source
L-Valine 10 mM (N)
+0.4
+0.2
+0.3
+0.8
N.D.
carbon source
D-Lactate 10 mM (C)
-0.0
+0.0
+1.1
+1.0
N.D.
nitrogen source
L-Glutamic 10 mM (N)
-0.0
-0.1
+1.4
+1.2
N.D.
stress
7H9 with Streptomycin 0.178 ug/mL
+0.2
-0.1
+0.1
+2.3
N.D.
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