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Fitness for 5 genes in
Mycobacterium tuberculosis H37Rv
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rv2421c and Rv2422 are separated by 274 nucleotides
Rv2422 and Rv2423 are separated by 241 nucleotides
Rv2423 and Rv2424c are separated by 132 nucleotides
Rv2424c and Rv2425c are separated by 88 nucleotides
Rv2421c: Rv2421c - Probable nicotinate-nucleotide adenylyltransferase NadD (deamido-NAD(+) pyrophosphorylase) (deamido-NAD(+) diphosphorylase) (nicotinate mononucleotide adenylyltransferase) (NAMN adenylyltransferase), at 2,718,173 to 2,718,808
Rv2421c
Rv2422: Rv2422 - Hypothetical protein, at 2,719,083 to 2,719,355
Rv2422
Rv2423: Rv2423 - Hypothetical protein, at 2,719,597 to 2,720,643
Rv2423
Rv2424c: Rv2424c - Probable transposase, at 2,720,776 to 2,721,777
Rv2424c
Rv2425c: Rv2425c - Conserved hypothetical protein, at 2,721,866 to 2,723,308
Rv2425c
Group
Condition
Rv2421c
Rv2422
Rv2423
Rv2424c
Rv2425c
stress
7H9 with Isoniazid 0.025 ug/mL
N.D.
-1.1
-0.0
N.D.
+0.1
stress
7H9 with Chloramphenicol 0.01 mM
N.D.
-0.8
+0.1
N.D.
-0.0
no stress control
no stress control
N.D.
-0.4
-0.1
N.D.
-0.2
stress
7H9 with Sisomicin 0.07 mM
N.D.
-0.5
+0.1
N.D.
+0.0
carbon source
cholesterol 100uM (C)
N.D.
-0.5
+0.2
N.D.
-0.1
pH
pH 4.5
N.D.
-0.4
-0.1
N.D.
+0.3
stress
7H9 with Irgasan 0.065 mM
N.D.
-0.4
-0.1
N.D.
+0.4
stress
7H9 with Bedaquiline 0.15 ug/mL
N.D.
-0.4
+0.1
N.D.
+0.3
stress
7H9 with Ciprofloxacin Hydrochloride 0.001 mM
N.D.
+0.6
+0.0
N.D.
-0.5
stress
7H9 with Ramoplanin 0.009 mM
N.D.
+0.6
-0.2
N.D.
-0.1
stress
7H9 with Novobiocin 0.004 mM
N.D.
+0.5
+0.1
N.D.
-0.2
stress
7H9 with Chlorhexidine diacetate salt 0.0021 mM
N.D.
+0.6
+0.0
N.D.
-0.3
stress
7H9 with EDTA (disodium salt) 0.2 mM
N.D.
+0.6
-0.1
N.D.
-0.1
no stress control
no stress control
N.D.
+0.4
-0.2
N.D.
+0.2
stress
7H9 with Zinc Pyrithione 0.00072 mM
N.D.
+0.3
-0.1
N.D.
+0.3
stress
7H9 with Doxycycline hyclate 0.0035 mM
N.D.
+0.3
-0.1
N.D.
+0.3
stress
7H9 with Formaldehyde 0.23 mM
N.D.
+0.6
-0.2
N.D.
+0.1
stress
7H9 with Menadione 0.005 mM
N.D.
+0.5
-0.1
N.D.
+0.2
stress
7H9 with Zinc Pyrithione 0.00072 mM
N.D.
+0.5
-0.1
N.D.
+0.2
stress
7H9 with Dodecyl Sulfate 0.02 vol%
N.D.
+0.4
-0.0
N.D.
+0.3
stress
7H9 with methylglyoxal 1.2 mM
N.D.
+0.8
-0.0
N.D.
-0.1
stress
7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
N.D.
+0.3
-0.0
N.D.
+0.4
stress
7H9 with nitrate 4 mM
N.D.
+0.4
-0.1
N.D.
+0.3
stress
7H9 with copper (II) chloride 0.08 mM
N.D.
+0.3
+0.1
N.D.
+0.3
stress
7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
N.D.
+0.4
+0.1
N.D.
+0.3
nitrogen source
L-Glutamine 10 mM (N)
N.D.
+0.9
-0.1
N.D.
-0.0
stress
7H9 with 2-Mercaptopyridine N-oxide 0.0078 mM
N.D.
+0.5
+0.1
N.D.
+0.1
stress
7H9 with Spectinomycin 0.029 mM
N.D.
+0.9
-0.0
N.D.
-0.1
stress
7H9 with Menadione 0.005 mM
N.D.
+0.6
+0.0
N.D.
+0.2
stress
7H9 with nitrite 1.5 mM; pH 5.5
N.D.
+0.5
+0.1
N.D.
+0.2
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