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Protein
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Fitness for 5 genes in
Mycobacterium tuberculosis H37Rv
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rv2341 and Rv2342 are separated by 255 nucleotides
Rv2342 and Rv2343c are separated by 3 nucleotides
Rv2343c and Rv2344c are separated by 4 nucleotides
Rv2344c and Rv2345 are separated by 68 nucleotides
Rv2341: Rv2341 - Probable conserved lipoprotein LppQ, at 2,619,597 to 2,620,016
Rv2341
Rv2342: Rv2342 - Conserved hypothetical protein, at 2,620,272 to 2,620,529
Rv2342
Rv2343c: Rv2343c - Probable DNA primase DnaG, at 2,620,533 to 2,622,452
Rv2343c
Rv2344c: Rv2344c - Probable deoxyguanosine triphosphate triphosphohydrolase Dgt (dGTPase) (dGTP triphosphohydrolase), at 2,622,457 to 2,623,752
Rv2344c
Rv2345: Rv2345 - Possible conserved transmembrane protein, at 2,623,821 to 2,625,803
Rv2345
Group
Condition
Rv2341
Rv2342
Rv2343c
Rv2344c
Rv2345
no stress control
no stress control
-0.5
-0.9
N.D.
-1.0
+0.0
stress
7H9 with Hydrogen peroxide 3.97 mM
-0.3
-0.6
N.D.
-1.0
-0.1
stress
7H9 with Menadione 0.005 mM
-0.3
-0.8
N.D.
-0.8
+0.0
stress
7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
+0.1
-0.8
N.D.
-1.0
-0.1
stress
7H9 with Isoniazid 0.025 ug/mL
-0.0
-1.0
N.D.
-0.6
-0.2
no stress control
no stress control
-0.4
-0.8
N.D.
-0.7
+0.1
stress
7H9 with Phenazine methosulfate 0.0054 mM
-0.1
-0.5
N.D.
-1.1
-0.0
stress
7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
-0.3
-0.5
N.D.
-0.7
-0.1
no stress control
no stress control
-0.2
-0.7
N.D.
-0.7
+0.0
stress
7H9 with 2,4-Dinitrophenol 0.1503 mM
-0.1
-0.5
N.D.
-1.1
+0.0
stress
7H9 with 2-Mercaptopyridine N-oxide 0.0078 mM
+0.1
+0.1
N.D.
-1.7
+0.0
stress
7H9 with Ethionamide 0.1 ug/mL
-0.1
-1.0
N.D.
-0.5
+0.2
stress
7H9 with Hydrogen peroxide 3.97 mM
-0.1
-0.2
N.D.
-1.1
-0.0
carbon source
butyrate 10 mM (C)
-0.2
-0.8
N.D.
-0.5
+0.0
no stress control
no stress control
+0.0
-0.4
N.D.
-0.9
-0.0
stress
7H9 with Amikacin di2 ug/mL
-0.2
-0.4
N.D.
-0.7
-0.0
stress
7H9 with nitrite 1.5 mM; pH 5.5
-0.2
-0.4
N.D.
-0.6
-0.1
stress
7H9 with nitrite 1.5 mM; pH 5.5
+0.0
-0.5
N.D.
-0.9
+0.1
no stress control
no stress control
-0.1
-0.7
N.D.
-0.6
+0.1
no stress control
no stress control
-0.1
-0.6
N.D.
-0.7
+0.2
stress
7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
+0.0
-0.4
N.D.
-0.8
-0.1
no stress control
no stress control
+0.1
-0.6
N.D.
-0.7
-0.1
stress
7H9 with Amikacin di2 ug/mL
+0.2
-0.8
N.D.
-0.7
+0.1
stress
7H9 with Doxycycline hyclate 0.0035 mM
+0.1
-0.6
N.D.
-0.7
+0.1
stress
7H9 with 2-Mercaptopyridine N-oxide 0.0078 mM
+0.2
-0.1
N.D.
-1.1
-0.1
stress
7H9 with Ethionamide 0.1 ug/mL
-0.2
-1.0
N.D.
+0.1
+0.1
stress
7H9 with 2,4-Dinitrophenol 0.1503 mM
+0.2
-0.2
N.D.
-1.0
+0.1
stress
7H9 with Moxifloxacin 0.121 ug/mL
-0.1
-0.6
N.D.
-0.5
+0.2
stress
7H9 with 8-hydroxy-nitroquinoline 0.03 mM
+0.3
-0.2
N.D.
-1.0
-0.0
pH
pH 4.5
+0.2
-1.0
N.D.
+0.4
-0.1
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