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Fitness for 5 genes in
Mycobacterium tuberculosis H37Rv
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rv1736c and Rv1737c overlap by 4 nucleotides
Rv1737c and Rv1738 are separated by 286 nucleotides
Rv1738 and Rv1739c are separated by 13 nucleotides
Rv1739c and Rv1740 are separated by 67 nucleotides
Rv1736c: Rv1736c - Probable nitrate reductase NarX, at 1,962,228 to 1,964,186
Rv1736c
Rv1737c: Rv1737c - Possible nitrate/nitrite transporter NarK2, at 1,964,183 to 1,965,370
Rv1737c
Rv1738: Rv1738 - Conserved protein, at 1,965,657 to 1,965,941
Rv1738
Rv1739c: Rv1739c - Probable sulphate-transport transmembrane protein ABC transporter, at 1,965,955 to 1,967,637
Rv1739c
Rv1740: Rv1740 - Possible antitoxin VapB34, at 1,967,705 to 1,967,917
Rv1740
Group
Condition
Rv1736c
Rv1737c
Rv1738
Rv1739c
Rv1740
stress
7H9 with Ofloxacin 0.8 ug/mL
-0.1
+0.1
N.D.
-0.2
-1.3
stress
7H9 with 2-Mercaptopyridine N-oxide 0.0078 mM
-0.2
+0.1
N.D.
-0.3
-0.9
stress
7H9 with Linezolid 0.44 ug/mL
-0.1
-0.3
N.D.
-0.3
-0.6
stress
7H9 with Ciprofloxacin Hydrochloride 0.001 mM
-0.2
-0.1
N.D.
-0.0
-0.9
stress
7H9 with EDTA (disodium salt) 0.2 mM
-0.0
+0.2
N.D.
-0.5
-0.7
stress
7H9 with Dicloxacillin 0.0069 mM
-0.1
+0.0
N.D.
-0.2
-0.7
no stress control
no stress control
-0.2
-0.1
N.D.
+0.1
-0.8
stress
7H9 with Bedaquiline 0.15 ug/mL
-0.1
+0.1
N.D.
-0.2
-0.8
stress
7H9 with Chlorpromazine 0.054 mM
-0.2
+0.2
N.D.
-0.3
-0.7
no stress control
no stress control
-0.2
-0.2
N.D.
+0.1
-0.6
stress
7H9 with Irgasan 0.065 mM
+0.3
-0.2
N.D.
+0.2
-1.1
carbon source
oleate 200uM (C)
-0.2
-0.1
N.D.
+0.2
-0.8
stress
7H9 with Antimycin A 0.0186 mM
+0.3
-0.5
N.D.
+0.1
-0.5
stress
7H9 with Sulfamethizole 0.026 mM
+0.1
+0.2
N.D.
-0.1
-0.6
stress
7H9 with 2-bromo-2-nitro-1,3-propanediol 0.1 mM
-0.0
+0.3
N.D.
+0.0
-0.8
stress
7H9 with Phenazine methosulfate 0.0054 mM
-0.1
+0.3
N.D.
-0.0
-0.6
carbon source
L-Asparagine (C)
-0.1
+0.4
N.D.
-0.1
-0.5
stress
7H9 with Cloxacillin 0.0386 mM
+0.1
-0.0
N.D.
+0.4
-0.7
stress
7H9 with nitrite 5 mM
-0.3
+0.3
N.D.
+0.1
-0.5
pH
7H9 pH 5.5
+0.0
-0.3
N.D.
-0.3
+0.4
stress
7H9 with methylglyoxal 1.2 mM
+0.1
+0.4
N.D.
+0.2
-0.9
stress
7H9 with Chloramphenicol 0.01 mM
+0.2
-0.1
N.D.
+0.3
-0.6
stress
7H9 with 2-bromo-2-nitro-1,3-propanediol 0.1 mM
-0.1
+0.5
N.D.
+0.2
-0.6
stress
7H9 with Hygromycin B 0.0095 mM
-0.1
+0.3
N.D.
-0.3
+0.3
nitrogen source
L-Asparagine 10 mM (N)
-0.3
+0.6
N.D.
+0.1
-0.0
stress
7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
+0.1
-0.2
N.D.
+0.2
+0.5
no stress control
no stress control
-0.1
+0.7
N.D.
-0.2
+0.4
carbon source
Palmitic 100 uM (C)
+0.1
-0.1
N.D.
+0.2
+1.1
stress
7H9 with Phenazine methosulfate 0.0054 mM
+0.3
+0.4
N.D.
-0.2
+0.8
stress
7H9 with Doxycycline hyclate 0.0035 mM
+0.1
+0.7
N.D.
+0.4
+0.5
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