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Protein
Homologs
Fitness for 5 genes in
Mycobacterium tuberculosis H37Rv
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rv1523 and Rv1524 are separated by 29 nucleotides
Rv1524 and Rv1525 are separated by 46 nucleotides
Rv1525 and Rv1526c overlap by 23 nucleotides
Rv1526c and Rv1527c are separated by 22 nucleotides
Rv1523: Rv1523 - Probable methyltransferase, at 1,717,653 to 1,718,696
Rv1523
Rv1524: Rv1524 - Probable glycosyltransferase, at 1,718,726 to 1,719,970
Rv1524
Rv1525: Rv1525 - Possible rhamnosyl transferase WbbL2, at 1,720,017 to 1,720,802
Rv1525
Rv1526c: Rv1526c - Probable glycosyltransferase, at 1,720,780 to 1,722,060
Rv1526c
Rv1527c: Rv1527c - Probable polyketide synthase Pks5, at 1,722,083 to 1,728,409
Rv1527c
Group
Condition
Rv1523
Rv1524
Rv1525
Rv1526c
Rv1527c
stress
7H9 with Ciprofloxacin Hydrochloride 0.001 mM
-0.1
-0.6
N.D.
-0.0
-0.2
stress
7H9 with Ofloxacin 0.8 ug/mL
-0.1
-0.6
N.D.
+0.1
-0.2
stress
7H9 with copper (II) chloride 0.08 mM
-0.0
-0.8
N.D.
+0.2
+0.1
pH
pH 4.5
+0.1
-0.6
N.D.
-0.1
+0.0
stress
7H9 with Pyrazinamide 50 ug/mL; pH 5.5
+0.3
-0.6
N.D.
-0.1
+0.0
stress
7H9 with Ethionamide 0.1 ug/mL
+0.0
-0.3
N.D.
+0.3
-0.2
stress
7H9 with Levofloxacin 0.3 ug/mL
-0.1
-0.4
N.D.
+0.4
-0.1
stress
7H9 with hypochlorite 0.4 vol%
-0.3
+0.5
N.D.
-0.2
-0.0
stress
7H9 with Dibucaine 0.21 mM
+0.3
+0.2
N.D.
-0.3
-0.2
stress
7H9 with Econazole nitrate salt 0.0082 mM
-0.2
+0.6
N.D.
-0.1
-0.1
stress
7H9 with Dicloxacillin 0.0069 mM
-0.2
+0.6
N.D.
-0.0
-0.2
stress
7H9 with Linezolid 0.44 ug/mL
+0.2
+0.4
N.D.
-0.2
-0.1
stress
7H9 with nitrite 1.5 mM; pH 5.5
+0.3
+0.3
N.D.
-0.3
+0.0
no stress control
no stress control
+0.3
-0.3
N.D.
+0.1
+0.2
nitrogen source
L-Valine 10 mM (N)
-0.2
+0.6
N.D.
-0.0
+0.0
stress
7H9 with Lomefloxacin 0.0035 mM
-0.2
+0.6
N.D.
-0.1
+0.0
stress
7H9 with Rifampicin 0.00045 ug/mL
+0.1
+0.5
N.D.
-0.3
+0.0
stress
7H9 with 2,4-Dinitrophenol 0.1503 mM
-0.2
+0.6
N.D.
+0.1
+0.1
no stress control
no stress control
-0.1
+0.8
N.D.
-0.0
-0.0
stress
7H9 with Amikacin di2 ug/mL
+0.1
+0.5
N.D.
-0.1
+0.2
stress
7H9 with Meropenem 9.6 ug/mL
+0.3
-0.2
N.D.
+0.5
+0.1
nitrogen source
Ammonium chloride 10mM (N)
+0.1
+0.8
N.D.
+0.0
-0.1
stress
7H9 with Ciprofloxacin Hydrochloride 0.001 mM
-0.0
+0.7
N.D.
-0.0
+0.2
stress
7H9 with Doxycycline hyclate 0.0035 mM
+0.2
+0.6
N.D.
-0.1
+0.1
stress
7H9 with Antimycin A 0.0186 mM
+0.1
+0.8
N.D.
-0.1
+0.1
stress
7H9 with Econazole nitrate salt 0.0082 mM
-0.0
+1.0
N.D.
+0.0
+0.0
carbon source
pyruvate (C)
+0.2
+0.6
N.D.
+0.1
+0.1
stress
7H9 with Phenazine ethosulfate 0.0137 mM
+0.2
+0.6
N.D.
+0.2
+0.0
stress
7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
+0.1
+0.9
N.D.
+0.1
-0.1
stress
7H9 with Dibucaine 0.21 mM
+0.3
+0.8
N.D.
+0.1
-0.1
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